RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 DPP7Q9UHL4 492 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 SCN11AQ9UI33 1791 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 ZNF580Q9UK33 172 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 PCDHB6Q9Y5E3 794 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 CDY2AQ9Y6F7 541 aa3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 MKI67P46013 3256 aaKnown RBP3.06□□□□□ -1.92
SMARCB1-208ENST00000634926 SIPA1L3O60292 1781 aaPredicted RBP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 N4BP2Q86UW6 1770 aaPredicted RBP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 TIAM2Q8IVF5 1701 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 TNRC6CQ9HCJ0 1690 aaKnown RBP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 CENPFP49454 3210 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 ATP10DQ9P241 1426 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 FLT4P35916 1363 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 TONSLQ96HA7 1378 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 CGNL1Q0VF96 1302 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 A6NNZ2 444 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 FAM227AF5H4B4 570 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 IFRD1O00458 451 aaPredicted RBP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 WNT10BO00744 389 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 HTRA2O43464 458 aaPredicted RBP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 TUSC2O75896 110 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 PCDH8O95206 1070 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 IGKV2-30P06310 120 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 EDNRBP24530 442 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 HOXC9P31274 260 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 FXR1P51114 621 aaKnown RBP eCLIP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 CHN2P52757 468 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 CDK17Q00537 523 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 FHL1Q13642 323 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 KLF9Q13886 244 aaPredicted RBP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 OVCH2Q7RTZ1 564 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 DENND1CQ8IV53 801 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 UNC5BQ8IZJ1 945 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 SPICE1Q8N0Z3 855 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 CAMKK1Q8N5S9 505 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 CDYL2Q8N8U2 506 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 ZBTB34Q8NCN2 500 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 GAB3Q8WWW8 586 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 IP6K1Q92551 441 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 FUBP1Q96AE4 644 aaKnown RBP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 NACC2Q96BF6 587 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 PAWRQ96IZ0 340 aaKnown RBP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 ELAC2Q9BQ52 826 aaKnown RBP3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 STK32BQ9NY57 414 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 SCOCQ9UIL1 159 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 LIMCH1Q9UPQ0 1083 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 IPPQ9Y573 584 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 SBF1O95248 1867 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 ARFGEF2Q9Y6D5 1785 aa3.05□□□□□ -1.92
SMARCB1-208ENST00000634926 KDM6AO15550 1401 aaPredicted RBP3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 PALLDQ8WX93 1383 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 CCDC154A6NI56 674 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 TBKBP1A7MCY6 615 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 EXOC5O00471 708 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 PMM2O15305 246 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 NRP2O60462 931 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 FOSP01100 380 aaPredicted RBP3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 HLA-DOAP06340 250 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 MCAMP43121 646 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 AGFG1P52594 562 aaKnown RBP3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 C1QTNF8P60827 252 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 FAM193AP78312 1265 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 MRPS35P82673 323 aaKnown RBP3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 PPARAQ07869 468 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 MUM1L1Q5H9M0 696 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 GJC2Q5T442 439 aaPredicted RBP3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 AGAP9Q5VTM2 703 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 TOGARAM2Q6ZUX3 1019 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 TAS1R1Q7RTX1 841 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 MORC1Q86VD1 984 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 KIAA0319LQ8IZA0 1049 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 TMEM132CQ8N3T6 1108 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 FAM156AQ8NDB6 213 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 PPP1R35Q8TAP8 253 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 ACTRT2Q8TDY3 377 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 GJA10Q969M2 543 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 RGMAQ96B86 450 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 CEP95Q96GE4 821 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 HIST1H2AHQ96KK5 128 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 SIN3AQ96ST3 1273 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 HIST1H2AJQ99878 128 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 ARPC5LQ9BPX5 153 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 ZSWIM1Q9BR11 485 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 WACQ9BTA9 647 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 NAA15Q9BXJ9 866 aaKnown RBP3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 GREM2Q9H772 168 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 KLHL11Q9NVR0 708 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 EVLQ9UI08 416 aaPredicted RBP3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 TAGLN3Q9UI15 199 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 PHTF1Q9UMS5 762 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 SYNPO2Q9UMS6 1093 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 USP18Q9UMW8 372 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 L1RE1Q9UN81 338 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 FAM50BQ9Y247 325 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 CFAP20Q9Y6A4 193 aaKnown RBP3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 AFDNP55196 1824 aaKnown RBP3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 BCORQ6W2J9 1755 aa3.04□□□□□ -1.92
SMARCB1-208ENST00000634926 KCPQ6ZWJ8 1503 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 ANKRD31Q8N7Z5 1873 aa3.03□□□□□ -1.92
SMARCB1-208ENST00000634926 USP47Q96K76 1375 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms