RNA–Protein interactions for RNA: ENST00000630585.1

UBA3-212, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 4 BASIC

Gene UBA3, Length 390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-212ENST00000630585 HOXC13P31276 330 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 GJA4P35212 333 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 PDE6CP51160 858 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 ATXN1P54253 815 aaKnown RBP12.93□□□□□ -0.34
UBA3-212ENST00000630585 USP4Q13107 963 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 NR1H3Q13133 447 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 CUL4BQ13620 913 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 ZNF77Q15935 545 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 BMT2Q1RMZ1 405 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 WDR72Q3MJ13 1102 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 MDH1BQ5I0G3 518 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 RESP18Q5W5W9 173 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 PKN3Q6P5Z2 889 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 DENND5BQ6ZUT9 1274 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 C12orf56Q8IXR9 622 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 SH3RF2Q8TEC5 729 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 ZNF516Q92618 1163 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 ATP2A3Q93084 1043 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 PCED1BQ96HM7 432 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 FBRSL1Q9HCM7 1045 aaKnown RBP12.93□□□□□ -0.34
UBA3-212ENST00000630585 TRPM5Q9NZQ8 1165 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 CFAP45Q9UL16 551 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 WNT6Q9Y6F9 365 aa12.93□□□□□ -0.34
UBA3-212ENST00000630585 KIAA1549LQ6ZVL6 1849 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 MYO18AQ92614 2054 aaKnown RBP12.92□□□□□ -0.34
UBA3-212ENST00000630585 EXOC3O60645 756 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 RNF40O75150 1001 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 PHACTR2O75167 634 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 TCF3P15923 654 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 PFKLP17858 780 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 PTPN1P18031 435 aaKnown RBP12.92□□□□□ -0.34
UBA3-212ENST00000630585 ATICP31939 592 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 PPP3CCP48454 512 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 MYL6P60660 151 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 USP46P62068 366 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 KNOP1Q1ED39 458 aaKnown RBP12.92□□□□□ -0.34
UBA3-212ENST00000630585 EML3Q32P44 896 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 FBXO43Q4G163 708 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 CEP57L1Q8IYX8 460 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 GOLGA5Q8TBA6 731 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 SYAP1Q96A49 352 aaPredicted RBP12.92□□□□□ -0.34
UBA3-212ENST00000630585 C8orf48Q96LL4 319 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 RTKNQ9BST9 563 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 NXF1Q9UBU9 619 aaKnown RBP12.92□□□□□ -0.34
UBA3-212ENST00000630585 ARHGAP26Q9UNA1 814 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 NME7Q9Y5B8 376 aa12.92□□□□□ -0.34
UBA3-212ENST00000630585 CNOT1A5YKK6 2376 aaKnown RBP12.92□□□□□ -0.34
UBA3-212ENST00000630585 CCDC163A0A0D9SF12 145 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 A8MXQ7 604 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 F8VP50 259 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 STAU1O95793 577 aaKnown RBP12.91□□□□□ -0.34
UBA3-212ENST00000630585 SLFN14P0C7P3 912 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 PXNP49023 591 aaPredicted RBP12.91□□□□□ -0.34
UBA3-212ENST00000630585 NOP14P78316 857 aaKnown RBP12.91□□□□□ -0.34
UBA3-212ENST00000630585 CSRP2Q16527 193 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 NAIF1Q69YI7 327 aaPredicted RBP12.91□□□□□ -0.34
UBA3-212ENST00000630585 GRAMD1CQ8IYS0 662 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 FAM160A2Q8N612 972 aaPredicted RBP12.91□□□□□ -0.34
UBA3-212ENST00000630585 GAB3Q8WWW8 586 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 CD101Q93033 1021 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 TTLL2Q9BWV7 592 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 ELOVL4Q9GZR5 314 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 GZF1Q9H116 711 aaPredicted RBP12.91□□□□□ -0.34
UBA3-212ENST00000630585 XYLT2Q9H1B5 865 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 LINC00597Q9H2U6 94 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 SEMA4GQ9NTN9 838 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 SERTAD1Q9UHV2 236 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 RCOR1Q9UKL0 485 aa12.91□□□□□ -0.34
UBA3-212ENST00000630585 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.91□□□□□ -0.34
UBA3-212ENST00000630585 TPRP12270 2363 aaKnown RBP12.91□□□□□ -0.34
UBA3-212ENST00000630585 ZNF840PA6NDX5 716 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 LEFTY2O00292 366 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 RPP40O75818 363 aaKnown RBP12.9□□□□□ -0.34
UBA3-212ENST00000630585 CLSTN1O94985 981 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 NFATC1O95644 943 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 ABL1P00519 1130 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 CCDC192P0DO97 292 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 CASP4P49662 377 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 AP3M2P53677 418 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 DNM1Q05193 864 aaKnown RBP12.9□□□□□ -0.34
UBA3-212ENST00000630585 PSMD2Q13200 908 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 BIRC3Q13489 604 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 PKP1Q13835 747 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 TDRD10Q5VZ19 366 aaKnown RBP12.9□□□□□ -0.34
UBA3-212ENST00000630585 PRR23CQ6ZRP0 262 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 CACNA2D4Q7Z3S7 1137 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 ABCA7Q8IZY2 2146 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 CAMKK1Q8N5S9 505 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 SPRYD3Q8NCJ5 442 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 B3GALNT2Q8NCR0 500 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 RPLP0P6Q8NHW5 317 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 PAGE5Q96GU1 130 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 SLITRK1Q96PX8 696 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 B3GNT5Q9BYG0 378 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 ZNF518BQ9C0D4 1074 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 DPEP3Q9H4B8 488 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
UBA3-212ENST00000630585 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.89□□□□□ -0.35
UBA3-212ENST00000630585 DCDC2BA2VCK2 349 aa12.89□□□□□ -0.35
UBA3-212ENST00000630585 CLDN5O00501 218 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms