RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 ORC1Q13415 861 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 BYSLQ13895 437 aaKnown RBP5.84□□□□□ -1.47
NEK3-211ENST00000629912 TFDP2Q14188 446 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 PDK2Q15119 407 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 OASLQ15646 514 aaKnown RBP5.84□□□□□ -1.47
NEK3-211ENST00000629912 CCDC142Q17RM4 750 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 CCDC14Q49A88 953 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 ODF2Q5BJF6 829 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 TNFAIP8L3Q5GJ75 292 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 FAM102AQ5T9C2 384 aaPredicted RBP5.84□□□□□ -1.47
NEK3-211ENST00000629912 TXNRD3NBQ6F5E7 133 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 GDF6Q6KF10 455 aaPredicted RBP5.84□□□□□ -1.47
NEK3-211ENST00000629912 HIBCHQ6NVY1 386 aaPredicted RBP5.84□□□□□ -1.47
NEK3-211ENST00000629912 PMF1Q6P1K2 205 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 OLFML1Q6UWY5 402 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 CXCL17Q6UXB2 119 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 FAM183BPQ6ZVS7 135 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 ZNF365Q70YC5 407 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 TTC30AQ86WT1 665 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 ALLCQ8N6M5 410 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 C12orf29Q8N999 325 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 ARRDC4Q8NCT1 418 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 APPL2Q8NEU8 664 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 OR6B3Q8NGW1 331 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 SPATA18Q8TC71 538 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 PPP1R13LQ8WUF5 828 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 KBTBD7Q8WVZ9 684 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 ATG4AQ8WYN0 398 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 TRIB2Q92519 343 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 CENPIQ92674 756 aaPredicted RBP5.84□□□□□ -1.47
NEK3-211ENST00000629912 PGM2Q96G03 612 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 TNIP3Q96KP6 325 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 ZIC5Q96T25 663 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 TBCBQ99426 244 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 HNRNPABQ99729 332 aaKnown RBP5.84□□□□□ -1.47
NEK3-211ENST00000629912 CFHR5Q9BXR6 569 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 CAPS2Q9BXY5 557 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 SENP6Q9GZR1 1112 aaPredicted RBP5.84□□□□□ -1.47
NEK3-211ENST00000629912 SNX25Q9H3E2 840 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 SEMA4AQ9H3S1 761 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 RSAD1Q9HA92 442 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 PRDM16Q9HAZ2 1276 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 AAASQ9NRG9 546 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 METTL5Q9NRN9 209 aaKnown RBP5.84□□□□□ -1.47
NEK3-211ENST00000629912 FAM105AQ9NUU6 356 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 SLC38A7Q9NVC3 462 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 KLK14Q9P0G3 267 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 DNPEPQ9ULA0 475 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 USP18Q9UMW8 372 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 ATP8A1Q9Y2Q0 1164 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 PTPN22Q9Y2R2 807 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 GIT1Q9Y2X7 761 aa5.84□□□□□ -1.47
NEK3-211ENST00000629912 GRIN2DO15399 1336 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 LRRD1A4D1F6 860 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 E5RJQ4 531 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 SMAPO00193 183 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 CYB561D2O14569 222 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 DNALI1O14645 258 aaPredicted RBP5.83□□□□□ -1.48
NEK3-211ENST00000629912 XPO1O14980 1071 aaKnown RBP5.83□□□□□ -1.48
NEK3-211ENST00000629912 PAPSS1O43252 624 aaPredicted RBP5.83□□□□□ -1.48
NEK3-211ENST00000629912 RIPK2O43353 540 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 CST8O60676 142 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 TTC4O95801 387 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 PGK1P00558 417 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 THP07101 528 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 PDGFRBP09619 1106 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 SKIP12755 728 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 CAPN2P17655 700 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 DESP17661 470 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 PTPN1P18031 435 aaKnown RBP5.83□□□□□ -1.48
NEK3-211ENST00000629912 LMO2P25791 158 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 HOXD10P28358 340 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 STIP1P31948 543 aaKnown RBP5.83□□□□□ -1.48
NEK3-211ENST00000629912 LHX1P48742 406 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 LMAN1P49257 510 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 RAB27AP51159 221 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 ITGA8P53708 1063 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 BCAT1P54687 386 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 SP3Q02447 781 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 BST2Q10589 180 aaKnown RBP5.83□□□□□ -1.48
NEK3-211ENST00000629912 NOGQ13253 232 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 PTK7Q13308 1070 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 SLC29A2Q14542 456 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 DSC3Q14574 896 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 MORF4L2Q15014 288 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 LLGL1Q15334 1064 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 KCNA10Q16322 511 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 FAM47CQ5HY64 1035 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 EFHC1Q5JVL4 640 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 GLRA4Q5JXX5 417 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 ZFYVE27Q5T4F4 411 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 DENND2CQ68D51 928 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 TWF2Q6IBS0 349 aaKnown RBP5.83□□□□□ -1.48
NEK3-211ENST00000629912 TRNP1Q6NT89 227 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 FAM43BQ6ZT52 329 aaPredicted RBP5.83□□□□□ -1.48
NEK3-211ENST00000629912 CYP4V2Q6ZWL3 525 aaPredicted RBP5.83□□□□□ -1.48
NEK3-211ENST00000629912 SLC26A9Q7LBE3 791 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 PCGF5Q86SE9 256 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 HOOK3Q86VS8 718 aa5.83□□□□□ -1.48
NEK3-211ENST00000629912 MAP7D3Q8IWC1 876 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms