RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 ICMTO60725 284 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PALMO75781 387 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CAPNS1P04632 268 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PF4V1P10720 104 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ANXA8P13928 327 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 STARP49675 285 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PDCLQ13371 301 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TAF5Q15542 800 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PTGISQ16647 500 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 IFI16Q16666 785 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TMEM259Q4ZIN3 620 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CEP55Q53EZ4 464 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 STRIP1Q5VSL9 837 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ANXA8L1Q5VT79 327 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 C1orf146Q5VVC0 180 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PYHIN1Q6K0P9 492 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 EMBQ6PCB8 327 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 MARK2Q7KZI7 788 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC51BQ86UW2 128 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM83AQ86UY5 434 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 NUTM2AQ8IVF1 878 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 LSMEM2Q8N112 164 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 CBARPQ8N350 705 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PTCD2Q8WV60 388 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 STMN2Q93045 179 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 TUBGCP5Q96RT8 1024 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ZPBPQ9BS86 351 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 HEMGNQ9BXL5 484 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 VTA1Q9NP79 307 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 PRDM11Q9NQV5 511 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 NDE1Q9NXR1 346 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 AASSQ9UDR5 926 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ANAPC5Q9UJX4 755 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 HBS1LQ9Y450 684 aaKnown RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ANKRD26Q9UPS8 1709 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 RREB1Q92766 1687 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 ATP8B3O60423 1300 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 NRKQ7Z2Y5 1582 aa4.05□□□□□ -1.76
R3HDM1-220ENST00000628915 RGSL1A5PLK6 1076 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 NDUFS8O00217 210 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TAF4O00268 1085 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CDK2AP1O14519 115 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ATP2A1O14983 1001 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 KCNN4O15554 427 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TRAPPC3O43617 180 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RNGTTO60942 597 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 NOS1APO75052 506 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CNOT3O75175 753 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 DNAJB6O75190 326 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CIB2O75838 187 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GOSR1O95249 250 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PON1P27169 355 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CRABP2P29373 138 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 HSPA9P38646 679 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RGS7P49802 495 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GATMP50440 423 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GTF2A2P52657 109 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ARFIP2P53365 341 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CLDN10P78369 228 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 MRPS25P82663 173 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 NNTQ13423 1086 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 DCTN2Q13561 401 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SF3B4Q15427 424 aaKnown RBP eCLIP4.04□□□□□ -1.768e-7■■■■□ 23.2
R3HDM1-220ENST00000628915 AMHR2Q16671 573 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ME3Q16798 604 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PTPN21Q16825 1174 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TIGD6Q17RP2 521 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CRTC2Q53ET0 693 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 GLE1Q53GS7 698 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 TDRD12Q587J7 1177 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ANKS6Q68DC2 871 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 C6orf89Q6UWU4 347 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CCNI2Q6ZMN8 369 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ANKMY2Q8IV38 441 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SULF1Q8IWU6 871 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ELMOD2Q8IZ81 293 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ENGASEQ8NFI3 743 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 OR52K1Q8NGK4 314 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PNPT1Q8TCS8 783 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SYN2Q92777 582 aaPredicted RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ASB2Q96Q27 587 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ZCCHC2Q9C0B9 1178 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CRISPLD2Q9H0B8 497 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 SLITRK6Q9H5Y7 841 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RUBCNLQ9H714 662 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 NCOA5Q9HCD5 579 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CNOT7Q9UIV1 285 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 PHTF1Q9UMS5 762 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM32AQ9Y421 112 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 L3MBTL1Q9Y468 752 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 DAGLAQ9Y4D2 1042 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 V9GYQ6 96 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 ESYT2A0FGR8 921 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 CLRN2A0PK11 232 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 H0Y626 953 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 BTN3A1O00481 513 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 RNF113AO15541 343 aaKnown RBP4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 USP1O94782 785 aa4.04□□□□□ -1.76
R3HDM1-220ENST00000628915 POP4O95707 220 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms