RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 TPGS2Q68CL5 300 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 PDE12Q6L8Q7 609 aaKnown RBP10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 FAM117BQ6P1L5 589 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 SLC39A11Q8N1S5 342 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 SCML4Q8N228 414 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 C12orf29Q8N999 325 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 UBA3Q8TBC4 463 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 MAIP1Q8WWC4 291 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 PCED1BQ96HM7 432 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 SLC4A5Q9BY07 1137 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 PACSIN1Q9BY11 444 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 ZCWPW1Q9H0M4 648 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 DPEP3Q9H4B8 488 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 CWH43Q9H720 699 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 KRT82Q9NSB4 513 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 TAS2R14Q9NYV8 317 aa10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 TIMM13Q9Y5L4 95 aaPredicted RBP10.68□□□□□ -0.7
FOXCUT-201ENST00000628509 MYH10P35580 1976 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 C1RP00736 705 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 KRT7P08729 469 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 CCDC130P13994 396 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 ITGB8P26012 769 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 SDC4P31431 198 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 GRIK1P39086 918 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 PSEN1P49768 467 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 ORC1Q13415 861 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 MAMLD1Q13495 774 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 MESDQ14696 234 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 VEPH1Q14D04 833 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 PPP2R5EQ16537 467 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 PTPN20Q4JDL3 420 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 SLC39A12Q504Y0 691 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 PKDCCQ504Y2 493 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 SEL1L2Q5TEA6 688 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 PAPD7Q5XG87 772 aaKnown RBP10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 RTL10Q7L3V2 364 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 SLFN11Q7Z7L1 901 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 TADA2BQ86TJ2 420 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 OSTM1Q86WC4 334 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 PALB2Q86YC2 1186 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 RHOT1Q8IXI2 618 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 FUKQ8N0W3 1084 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 NIPA2Q8N8Q9 360 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 RIN2Q8WYP3 895 aaPredicted RBP10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 RABGGTAQ92696 567 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 CLP1Q92989 425 aaKnown RBP10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 MYLPFQ96A32 169 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 MCRS1Q96EZ8 462 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 RNPC3Q96LT9 517 aaKnown RBP10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 CDK5RAP1Q96SZ6 601 aaKnown RBP10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 C11orf84Q9BUA3 381 aaPredicted RBP10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 EMILIN2Q9BXX0 1053 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 B3GNT5Q9BYG0 378 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 CSNK1G1Q9HCP0 422 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 DDX56Q9NY93 547 aaKnown RBP10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 FNIP2Q9P278 1114 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 MTRRQ9UBK8 725 aa10.67□□□□□ -0.7
FOXCUT-201ENST00000628509 GOLGA6L10A0A0M3HER8 536 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 RCCD1A6NED2 376 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 E5RJQ4 531 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 GOLGA8SH3BPF8 625 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 I3L4J1 428 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 CAPN9O14815 690 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 SNPHO15079 494 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 PSTPIP1O43586 416 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 BUB1BO60566 1050 aaPredicted RBP10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 PROSCO94903 275 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 F9P00740 461 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 ADH1AP07327 375 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 GPD1P21695 349 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 PSMA2P25787 234 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 GBP1P32455 592 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 SSR1P43307 286 aaKnown RBP10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 RPL34P49207 117 aaKnown RBP10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 GATMP50440 423 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 MAP3K7CLP57077 242 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 DSG1Q02413 1049 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 RAB30Q15771 203 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 TAF12Q16514 161 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 TCTN1Q2MV58 587 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 ZFYVE27Q5T4F4 411 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 MEI1Q5TIA1 1274 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 LRRC38Q5VT99 294 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 SCARA3Q6AZY7 606 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 SLC8B1Q6J4K2 584 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 CD300LGQ6UXG3 332 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 SND1Q7KZF4 910 aaKnown RBP eCLIP10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 BEND5Q7L4P6 421 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 SLC26A9Q7LBE3 791 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 PIGZQ86VD9 579 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 TTC30AQ86WT1 665 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 XYLT1Q86Y38 959 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 TNS4Q8IZW8 715 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 FBXO22Q8NEZ5 403 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 C8orf48Q96LL4 319 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 CPXM1Q96SM3 734 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 CNPY3Q9BT09 278 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 GPR62Q9BZJ7 368 aa10.66□□□□□ -0.7
FOXCUT-201ENST00000628509 CARD9Q9H257 536 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms