RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 TCP1P17987 556 aaKnown RBP10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 PTPN1P18031 435 aaKnown RBP10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 PDCLQ13371 301 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 MAMLD1Q13495 774 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 WHAMMP3Q1A5X7 153 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 KIAA0319Q5VV43 1072 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 C11orf63Q6NUN7 778 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 DNAJC24Q6P3W2 148 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 METTL23Q86XA0 190 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 HOMEZQ8IX15 550 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 CRIPAKQ8N1N5 446 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 B3GALNT2Q8NCR0 500 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 MSANTD4Q8NCY6 345 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 LRRN4CLQ8ND94 238 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 MNS1Q8NEH6 495 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 COG1Q8WTW3 980 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 RSPH1Q8WYR4 309 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 C18orf8Q96DM3 657 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 CAPZA3Q96KX2 299 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 SUSD3Q96L08 255 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 CPXM1Q96SM3 734 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 SYT15Q9BQS2 421 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 SYNCQ9H7C4 482 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 NRDE2Q9H7Z3 1164 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 PRDM10Q9NQV6 1147 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 PARVAQ9NVD7 372 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 DNAJB4Q9UDY4 337 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 ANAPC7Q9UJX3 599 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 STRIP2Q9ULQ0 834 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 PRG3Q9Y2Y8 225 aaPredicted RBP10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 ALG6Q9Y672 507 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 SCINQ9Y6U3 715 aa10.49□□□□□ -0.73
SOX2-OT-244ENST00000627738 TTC3P53804 2025 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 TCRBV5S1A1TA0A578 114 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 FAM187AA6NFU0 413 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 TMEM189-UBE2V1I3L0A0 370 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 TULP2O00295 520 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 UPP2O95045 317 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 CYP11A1P05108 521 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 SETSIPP0DME0 302 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 RAG1P15918 1043 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 EN2P19622 333 aaPredicted RBP10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 COMTP21964 271 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 TKTP29401 623 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 CXCR5P32302 372 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 SOX11P35716 441 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 RGS7P49802 495 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 TERF1P54274 439 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 PDE4CQ08493 712 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 CCDC142Q17RM4 750 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 LINC01559Q495D7 138 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 MDH1BQ5I0G3 518 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 XYLT1Q86Y38 959 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 CPNE8Q86YQ8 564 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 CEP112Q8N8E3 955 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 ANKRD52Q8NB46 1076 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 C3orf20Q8ND61 904 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 FEZF2Q8TBJ5 459 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 SPATA18Q8TC71 538 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 SLC2A14Q8TDB8 520 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 IPO4Q8TEX9 1081 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 SLC35F5Q8WV83 523 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 HES6Q96HZ4 224 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 HNRNPABQ99729 332 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 RTP3Q9BQQ7 232 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 SELENOOQ9BVL4 669 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 MRPL9Q9BYD2 267 aaKnown RBP10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 TRIM7Q9C029 511 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 CRTAC1Q9NQ79 661 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 ST7Q9NRC1 585 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 DSEQ9UL01 958 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 CDH9Q9ULB4 789 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 MICAL3Q7RTP6 2002 aa10.48□□□□□ -0.73
SOX2-OT-244ENST00000627738 ABHD14A-ACY1A0A1B0GW23 586 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 ARHGEF37A1IGU5 675 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 MYBPHLA2RUH7 354 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 TMEM191CA6NGB0 347 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 E5RJQ4 531 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 GOLGA8SH3BPF8 625 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 MYO1FO00160 1098 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 PIK3R2O00459 728 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 CLDN5O00501 218 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 KCNK3O14649 394 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 NRP1O14786 923 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 DDX3YO15523 660 aaKnown RBP10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 SPOPO43791 374 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 TADA2AO75478 443 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 CSF2RAP15509 400 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 TYMPP19971 482 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 PCSK1P29120 753 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 GABRB2P47870 512 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 SLC11A1P49279 550 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 BCAT1P54687 386 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 GSCP56915 257 aaPredicted RBP10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 RPL7AP62424 266 aaKnown RBP10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 BST2Q10589 180 aaKnown RBP10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 ZNF268Q14587 947 aaPredicted RBP10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 OVOS1Q6IE37 1185 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 MFSD5Q6N075 450 aa10.47□□□□□ -0.73
SOX2-OT-244ENST00000627738 PMF1Q6P1K2 205 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms