RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PABPC1LQ4VXU2 614 aaKnown RBP15.6■□□□□ 0.09
PNKP-221ENST00000627317 SGO2Q562F6 1265 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 PRSS36Q5K4E3 855 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 SMYD5Q6GMV2 418 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 VSTM1Q6UX27 236 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 CACNA2D4Q7Z3S7 1137 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 SCN4BQ8IWT1 228 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 NPAS3Q8IXF0 933 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 ELMOD1Q8N336 334 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 SLC2A14Q8TDB8 520 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 RSAD2Q8WXG1 361 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 FGF13Q92913 245 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 CYFIP2Q96F07 1278 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 SMARCD1Q96GM5 515 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 NAA15Q9BXJ9 866 aaKnown RBP15.6■□□□□ 0.09
PNKP-221ENST00000627317 STK33Q9BYT3 514 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 KRT82Q9NSB4 513 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 CDH7Q9ULB5 785 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 DUSP12Q9UNI6 340 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 CNTN6Q9UQ52 1028 aa15.6■□□□□ 0.09
PNKP-221ENST00000627317 ZFP37Q9Y6Q3 630 aaPredicted RBP15.6■□□□□ 0.09
PNKP-221ENST00000627317 F8VZ95 297 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 AP1G2O75843 785 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 SOAT2O75908 522 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 PDGFBP01127 241 aaPredicted RBP15.59■□□□□ 0.09
PNKP-221ENST00000627317 RHOP08100 348 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 FAM200BP0CF97 657 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 PNMA6AP0CW24 399 aaPredicted RBP15.59■□□□□ 0.09
PNKP-221ENST00000627317 VDRP11473 427 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 ANXA13P27216 316 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 EPHB3P54753 998 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 EPHA5P54756 1037 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 RPL10AP62906 217 aaKnown RBP15.59■□□□□ 0.09
PNKP-221ENST00000627317 VEPH1Q14D04 833 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 SARM1Q6SZW1 724 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 FUKQ8N0W3 1084 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 TRIM5Q9C035 493 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 CEP72Q9P209 647 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 KIAA1257Q9ULG3 409 aa15.59■□□□□ 0.09
PNKP-221ENST00000627317 RNF225M0QZC1 329 aaPredicted RBP15.58■□□□□ 0.08
PNKP-221ENST00000627317 FOXN3O00409 490 aaPredicted RBP15.58■□□□□ 0.08
PNKP-221ENST00000627317 TRIM66O15016 1216 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 NARSO43776 548 aaKnown RBP15.58■□□□□ 0.08
PNKP-221ENST00000627317 BRD2P25440 801 aaKnown RBP15.58■□□□□ 0.08
PNKP-221ENST00000627317 GNA15P30679 374 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 GRIK1P39086 918 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 PBX1P40424 430 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 CCR2P41597 374 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 GOLGA7BQ2TAP0 167 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 PPP1R26Q5T8A7 1209 aaPredicted RBP15.58■□□□□ 0.08
PNKP-221ENST00000627317 ARHGAP17Q68EM7 881 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 SLC44A3Q8N4M1 653 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 FBXL6Q8N531 539 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 NXPE3Q969Y0 559 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 PBXIP1Q96AQ6 731 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 HNRNPABQ99729 332 aaKnown RBP15.58■□□□□ 0.08
PNKP-221ENST00000627317 DMAP1Q9NPF5 467 aaPredicted RBP15.58■□□□□ 0.08
PNKP-221ENST00000627317 HESX1Q9UBX0 185 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 HCN4Q9Y3Q4 1203 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 NUMBLQ9Y6R0 609 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 PTPRDP23468 1912 aa15.58■□□□□ 0.08
PNKP-221ENST00000627317 CYP26A1O43174 497 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 THAP12O43422 761 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 MOSPD3O75425 235 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 MICAL2O94851 1124 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 CALCAP01258 141 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 CEBPBP17676 345 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 ATF6P18850 670 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 STAT1P42224 750 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 GPR15P49685 360 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 SLC8A3P57103 927 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 BPIFB4P59827 614 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 PTK2Q05397 1052 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 STILQ15468 1287 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 TAF12Q16514 161 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 DDR2Q16832 855 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 PARM1Q6UWI2 310 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 PAQR9Q6ZVX9 377 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 ITIH5Q86UX2 942 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 FAM71AQ8IYT1 594 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 GIPC2Q8TF65 315 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 FGF14Q92915 247 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 IQCDQ96DY2 449 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 NUP58Q9BVL2 599 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 LRRC3Q9BY71 257 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 GPR88Q9GZN0 384 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 ASB3Q9Y575 518 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 KMT2EQ8IZD2 1858 aa15.57■□□□□ 0.08
PNKP-221ENST00000627317 DOCK6Q96HP0 2047 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 F8VP50 259 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 O00370 1275 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 MED7O43513 233 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 GFPT2O94808 682 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 NPR3P17342 541 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 PTPN2P17706 415 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 SOX5P35711 763 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 PDE6CP51160 858 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 CACNA2D1P54289 1103 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 BCAT1P54687 386 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 VCPP55072 806 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms