RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SNTG2Q9NY99 539 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 LIMA1Q9UHB6 759 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 XPO7Q9UIA9 1087 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 TRMT6Q9UJA5 497 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 IFRD1O00458 451 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 CST8O60676 142 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 PLA2G4AP47712 749 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 RFX5P48382 616 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 GUCY1A3Q02108 690 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 MED21Q13503 144 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SMTNL2Q2TAL5 461 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 REM2Q8IYK8 340 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 STX19Q8N4C7 294 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 DAGLBQ8NCG7 672 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 TFB1MQ8WVM0 346 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 TASP1Q9H6P5 420 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 WDR41Q9HAD4 459 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC28A3Q9HAS3 691 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC24A3Q9HC58 644 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SMPD4Q9NXE4 827 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 WWOXQ9NZC7 414 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 DTNAQ9Y4J8 743 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 LOC102724159A0A0B4J2E5 919 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 GYG2O15488 501 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 NDUFS2O75306 463 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 MAPK9P45984 424 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 NDUFV1P49821 464 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SERPINB9P50453 376 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 CORO7P57737 925 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 PWP2Q15269 919 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC45A4Q5BKX6 768 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 DACT2Q5SW24 774 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 CXCL17Q6UXB2 119 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 C4orf19Q8IY42 314 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 AHCYL2Q96HN2 611 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 ADAM2Q99965 735 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 RUSC1Q9BVN2 902 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 ANLNQ9NQW6 1124 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SNX12Q9UMY4 172 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF142P52746 1687 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 CNTNAP2Q9UHC6 1331 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 RBP3P10745 1247 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 MCF2P10911 925 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 PBLDP30039 288 aaPredicted RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 SOAT1P35610 550 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 BYSLQ13895 437 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 CCNI2Q6ZMN8 369 aaPredicted RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF410Q86VK4 478 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 NDEL1Q9GZM8 345 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 SENP2Q9HC62 589 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 FAM205AQ6ZU69 1335 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 PDZK1P1A8MUH7 402 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 SPAG7O75391 227 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 CSDE1O75534 798 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 CCL23P55773 120 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 ANTXR2P58335 489 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 CREMQ03060 361 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 ORC1Q13415 861 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 NR1I3Q14994 352 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 EPC2Q52LR7 807 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 SGO1Q5FBB7 561 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 FBXW10Q5XX13 1052 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 TRIM65Q6PJ69 517 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 DEFB118Q96PH6 123 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 C1QTNF7Q9BXJ2 289 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 YY1AP1Q9H869 796 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 RAD18Q9NS91 495 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 TIMM13Q9Y5L4 95 aaPredicted RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 PRKAR2AP13861 404 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 PTPRAP18433 802 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 MDH1P40925 334 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 ARFIP2P53365 341 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 HIRAP54198 1017 aaPredicted RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 PABPC1LQ4VXU2 614 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 DACH2Q96NX9 599 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 LRRC1Q9BTT6 524 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 OSBPL8Q9BZF1 889 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 SMYD3Q9H7B4 428 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC9A3R1O14745 358 aaPredicted RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 NDUFB5O43674 189 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC37A4O43826 429 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 FKBP1AP62942 108 aaKnown RBP10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 TROAPQ12815 778 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 STAT4Q14765 748 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 SUSD6Q92537 303 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 APBA2Q99767 749 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 ADGRE3Q9BY15 652 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 GOLPH3Q9H4A6 298 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 CXorf56Q9H5V9 222 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 CYP3A43Q9HB55 503 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 STOML1Q9UBI4 398 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 DCTN4Q9UJW0 460 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 ITGA11Q9UKX5 1188 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 ZMYM2Q9UBW7 1377 aa10.16□□□□□ -0.78
CLTCL1-211ENST00000621271 GTPBP10A4D1E9 387 aaKnown RBP10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 TBC1D3BA6NDS4 549 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 SOAT2O75908 522 aa10.15□□□□□ -0.78
CLTCL1-211ENST00000621271 CHGBP05060 677 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms