RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 COL4A2P08572 1712 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 GOLGA6L4A6NEF3 574 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 OTOL1A6NHN0 477 aaPredicted RBP21.83■■□□□ 1.09
SMC6-210ENST00000621152 MAPK13O15264 365 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 ABL1P00519 1130 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 P4HA1P13674 534 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 RPL13P26373 211 aaKnown RBP21.83■■□□□ 1.09
SMC6-210ENST00000621152 CACNA2D1P54289 1103 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 NOP14P78316 857 aaKnown RBP21.83■■□□□ 1.09
SMC6-210ENST00000621152 NUCB2P80303 420 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 MTF1Q14872 753 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 PDGFRLQ15198 375 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 NFIL3Q16649 462 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 SPEM1Q8N4L4 309 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 SUMF1Q8NBK3 374 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 TNIP3Q96KP6 325 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 MED10Q9BTT4 135 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 TTLL2Q9BWV7 592 aa21.83■■□□□ 1.09
SMC6-210ENST00000621152 FAM126AQ9BYI3 521 aaPredicted RBP21.83■■□□□ 1.09
SMC6-210ENST00000621152 DUS2Q9NX74 493 aaKnown RBP21.83■■□□□ 1.09
SMC6-210ENST00000621152 NUP210Q8TEM1 1887 aaPredicted RBP21.83■■□□□ 1.08
SMC6-210ENST00000621152 F5P12259 2224 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 ZNF840PA6NDX5 716 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 AKAP3O75969 853 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 KRT13P13646 458 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 NRLP54845 237 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 AMPD2Q01433 879 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 SATB1Q01826 763 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 TAF10Q12962 218 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 ACOT1Q86TX2 421 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 SH3RF2Q8TEC5 729 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 TAF4BQ92750 862 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 KCNK16Q96T55 309 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.82■■□□□ 1.082e-6■■■■■ 33.6
SMC6-210ENST00000621152 TMEM30AQ9NV96 361 aa21.82■■□□□ 1.08
SMC6-210ENST00000621152 HLA-DRAP01903 254 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 PSMC2P35998 433 aaKnown RBP21.81■■□□□ 1.08
SMC6-210ENST00000621152 PPP3CCP48454 512 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 GCLMP48507 274 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 PDE6CP51160 858 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 IFRD2Q12894 506 aaPredicted RBP21.81■■□□□ 1.08
SMC6-210ENST00000621152 PNOCQ13519 176 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 ZNF77Q15935 545 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 SPOPLQ6IQ16 392 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 Q6ZS52 159 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 PAQR9Q6ZVX9 377 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 INTS8Q75QN2 995 aaKnown RBP21.81■■□□□ 1.08
SMC6-210ENST00000621152 FAM186BQ8IYM0 893 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 FMR1NBQ8N0W7 255 aaPredicted RBP21.81■■□□□ 1.08
SMC6-210ENST00000621152 NUP93Q8N1F7 819 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 SYNPOQ8N3V7 929 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 OSCP1Q8WVF1 389 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 HINFPQ9BQA5 517 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 USP34Q70CQ2 3546 aa21.81■■□□□ 1.08
SMC6-210ENST00000621152 LILRB5O75023 590 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 ASS1P00966 412 aaKnown RBP21.8■■□□□ 1.08
SMC6-210ENST00000621152 TDGF1P13385 188 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 PFKLP17858 780 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 YWHAQP27348 245 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 PIK3CAP42336 1068 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 IFNAR2P48551 515 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 GALK1P51570 392 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 GRSF1Q12849 480 aaKnown RBP eCLIP21.8■■□□□ 1.08
SMC6-210ENST00000621152 CCINQ13939 588 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 SMYD4Q8IYR2 804 aaPredicted RBP21.8■■□□□ 1.08
SMC6-210ENST00000621152 DCLK2Q8N568 766 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 RUBCNQ92622 972 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 SLITRK1Q96PX8 696 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 RNF38Q9H0F5 515 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 LINC00597Q9H2U6 94 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 MMRN2Q9H8L6 949 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 ECT2Q9H8V3 914 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 CHORDC1Q9UHD1 332 aaPredicted RBP21.8■■□□□ 1.08
SMC6-210ENST00000621152 ARHGAP26Q9UNA1 814 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 WNT6Q9Y6F9 365 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 ATP8B3O60423 1300 aa21.8■■□□□ 1.08
SMC6-210ENST00000621152 PTPRZ1P23471 2315 aaPredicted RBP21.79■■□□□ 1.08
SMC6-210ENST00000621152 DENND4CQ5VZ89 1909 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 PATJQ8NI35 1801 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 TRDMT1O14717 391 aaKnown RBP21.79■■□□□ 1.08
SMC6-210ENST00000621152 TRIM49P0CI25 452 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 TRIM49CP0CI26 452 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 NDST1P52848 882 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 PPP3CAQ08209 521 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 ORC1Q13415 861 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 TMEM196Q5HYL7 178 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 FSTL4Q6MZW2 842 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 CRYBG2Q8N1P7 616 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 CPA6Q8N4T0 437 aa21.79■■□□□ 1.08
SMC6-210ENST00000621152 FBRSL1Q9HCM7 1045 aaKnown RBP21.79■■□□□ 1.08
SMC6-210ENST00000621152 RTN3O95197 1032 aaPredicted RBP21.78■■□□□ 1.08
SMC6-210ENST00000621152 GJA4P35212 333 aa21.78■■□□□ 1.08
SMC6-210ENST00000621152 ZXDBP98169 803 aa21.78■■□□□ 1.08
SMC6-210ENST00000621152 USP4Q13107 963 aa21.78■■□□□ 1.08
SMC6-210ENST00000621152 NR1H3Q13133 447 aa21.78■■□□□ 1.08
SMC6-210ENST00000621152 FAM35AQ86V20 835 aa21.78■■□□□ 1.08
SMC6-210ENST00000621152 UNC93AQ86WB7 457 aa21.78■■□□□ 1.08
SMC6-210ENST00000621152 FUKQ8N0W3 1084 aa21.78■■□□□ 1.08
SMC6-210ENST00000621152 CHFRQ96EP1 664 aa21.78■■□□□ 1.08
SMC6-210ENST00000621152 EEF2KMTQ96G04 330 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms