RNA–Protein interactions for RNA: ENST00000621069.1

KRBA1-209, Transcript of KRAB-A domain containing 1, humanhuman

TSL 1 (best)

Gene KRBA1, Length 3,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-209ENST00000621069 RTN2O75298 545 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 COMTP21964 271 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 SLC11A1P49279 550 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 SLC8A3P57103 927 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 GUCY1A3Q02108 690 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 SIX6OS1Q8N1H7 587 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 KRT35Q92764 455 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 CALN1Q9BXU9 219 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 PLEKHA5Q9HAU0 1116 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 GIT1Q9Y2X7 761 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 USP17L7P0C7H9 530 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 PSMA2P25787 234 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 FOXR2Q6PJQ5 311 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 OTUD6BQ8N6M0 293 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 B3GALNT2Q8NCR0 500 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 FAM161BQ96MY7 647 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 CD248Q9HCU0 757 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 CHST12Q9NRB3 414 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 AMFRQ9UKV5 643 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 KNL1Q8NG31 2342 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 GRID2IPA4D2P6 1211 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 KRT3P12035 628 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 PTPN1P18031 435 aaKnown RBP13.2□□□□□ -0.3
KRBA1-209ENST00000621069 SP100P23497 879 aaPredicted RBP13.2□□□□□ -0.3
KRBA1-209ENST00000621069 RFC1P35251 1148 aaPredicted RBP13.2□□□□□ -0.3
KRBA1-209ENST00000621069 EPHB4P54760 987 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 FAM109BQ6ICB4 259 aaPredicted RBP13.2□□□□□ -0.3
KRBA1-209ENST00000621069 ACAD10Q6JQN1 1059 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 WDR93Q6P2C0 686 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 CCNI2Q6ZMN8 369 aaPredicted RBP13.2□□□□□ -0.3
KRBA1-209ENST00000621069 ENOSF1Q7L5Y1 443 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 TMC7Q7Z402 723 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 TMEM199Q8N511 208 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 TSEN2Q8NCE0 465 aaKnown RBP13.2□□□□□ -0.3
KRBA1-209ENST00000621069 WHAMMQ8TF30 809 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 PCED1BQ96HM7 432 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 CFAP57Q96MR6 1250 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 PPP1R10Q96QC0 940 aaKnown RBP13.2□□□□□ -0.3
KRBA1-209ENST00000621069 MAGEB5Q9BZ81 275 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 ALG6Q9Y672 507 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 CDY1Q9Y6F8 540 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
KRBA1-209ENST00000621069 ANKRD62A6NC57 917 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 SEC24CP53992 1094 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 CACNA2D1P54289 1103 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 TRIP13Q15645 432 aaPredicted RBP13.19□□□□□ -0.3
KRBA1-209ENST00000621069 CLEC16AQ2KHT3 1053 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 DCAF6Q58WW2 860 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 TTC30AQ86WT1 665 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 TRIM58Q8NG06 486 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 NACA2Q9H009 215 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 C10orf88Q9H8K7 445 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 BCCIPQ9P287 314 aaKnown RBP eCLIP13.19□□□□□ -0.3
KRBA1-209ENST00000621069 OR1D2P34982 312 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 RAB27AP51159 221 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 ACTN3Q08043 901 aaPredicted RBP13.19□□□□□ -0.3
KRBA1-209ENST00000621069 KYAT1Q16773 422 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 ASTE1Q2TB18 679 aaPredicted RBP13.19□□□□□ -0.3
KRBA1-209ENST00000621069 PLEKHG4Q58EX7 1191 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 SPATA2LQ8IUW3 424 aaPredicted RBP13.19□□□□□ -0.3
KRBA1-209ENST00000621069 MCOLN2Q8IZK6 566 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 IQCDQ96DY2 449 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■■■■■ 31.4
KRBA1-209ENST00000621069 SIK2Q9H0K1 926 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 ERBB2P04626 1255 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 CYP3A5P20815 502 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 HOXC8P31273 242 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 NOMO3P69849 1222 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 TSPY1Q01534 308 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 CCDC91Q7Z6B0 441 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 PIGZQ86VD9 579 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 TMPRSS4Q9NRS4 437 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 RGS18Q9NS28 235 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 TMLHEQ9NVH6 421 aa13.19□□□□□ -0.3
KRBA1-209ENST00000621069 LRRD1A4D1F6 860 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 MED7O43513 233 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 TLL1O43897 1013 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 FGBP02675 491 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 ODC1P11926 461 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 KRT10P13645 584 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 PDGFRAP16234 1089 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 CKAP4Q07065 602 aaKnown RBP13.18□□□□□ -0.3
KRBA1-209ENST00000621069 DUSP4Q13115 394 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 TUBB2AQ13885 445 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 UPP1Q16831 310 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 KIAA0319Q5VV43 1072 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 TRAF7Q6Q0C0 670 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 MIB1Q86YT6 1006 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 CD302Q8IX05 232 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 KBTBD7Q8WVZ9 684 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 RFFLQ8WZ73 363 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 TUBB2BQ9BVA1 445 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 TSGA10Q9BZW7 698 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 SAE1Q9UBE0 346 aaPredicted RBP13.18□□□□□ -0.3
KRBA1-209ENST00000621069 STXBP5LQ9Y2K9 1186 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 CTNNA2P26232 953 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 HNRNPH3P31942 346 aaKnown RBP13.18□□□□□ -0.3
KRBA1-209ENST00000621069 GRIK3Q13003 919 aa13.18□□□□□ -0.3
KRBA1-209ENST00000621069 MTMR3Q13615 1198 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms