RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PNOCQ13519 176 aa18.28■□□□□ 0.52
HMGN3-203ENST00000620514 RUNX3Q13761 415 aa18.28■□□□□ 0.52
HMGN3-203ENST00000620514 SPOPLQ6IQ16 392 aa18.28■□□□□ 0.52
HMGN3-203ENST00000620514 Q6ZS52 159 aa18.28■□□□□ 0.52
HMGN3-203ENST00000620514 FMR1NBQ8N0W7 255 aaPredicted RBP18.28■□□□□ 0.52
HMGN3-203ENST00000620514 GUF1Q8N442 669 aaKnown RBP18.28■□□□□ 0.52
HMGN3-203ENST00000620514 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.28■□□□□ 0.52
HMGN3-203ENST00000620514 HLA-DRAP01903 254 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 USP17L7P0C7H9 530 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 TDGF1P13385 188 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 VAMP7P51809 220 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 FAM160A1Q05DH4 1040 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 ORC1Q13415 861 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 MTF1Q14872 753 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 ZNF77Q15935 545 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 NFIL3Q16649 462 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 SGSM1Q2NKQ1 1148 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 ZCWPW2Q504Y3 356 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 C1orf228Q6PIY5 440 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 NELL1Q92832 810 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 CHFRQ96EP1 664 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 CEP295NLQ96MC4 621 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 TTLL2Q9BWV7 592 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 ELOVL4Q9GZR5 314 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 ZSCAN32Q9NX65 697 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 HMGXB4Q9UGU5 601 aa18.27■□□□□ 0.52
HMGN3-203ENST00000620514 IKBKBO14920 756 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 MAPK13O15264 365 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 KINO60870 393 aaKnown RBP18.26■□□□□ 0.51
HMGN3-203ENST00000620514 HDCP19113 662 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 PIK3CAP42336 1068 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 GCLMP48507 274 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 NOP14P78316 857 aaKnown RBP18.26■□□□□ 0.51
HMGN3-203ENST00000620514 NUCB2P80303 420 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 SATB1Q01826 763 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 PPP3CAQ08209 521 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 IFRD2Q12894 506 aaPredicted RBP18.26■□□□□ 0.51
HMGN3-203ENST00000620514 USP4Q13107 963 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 LRRC32Q14392 662 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 CC2D1AQ6P1N0 951 aaPredicted RBP18.26■□□□□ 0.51
HMGN3-203ENST00000620514 MAMSTRQ6ZN01 415 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 PAQR9Q6ZVX9 377 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 ACOT1Q86TX2 421 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 FAM35AQ86V20 835 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 FAM186BQ8IYM0 893 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 ZBTB44Q8NCP5 570 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 SH3RF2Q8TEC5 729 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 IER2Q9BTL4 223 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 C2orf42Q9NWW7 574 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 TRPM5Q9NZQ8 1165 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 PCDHGA2Q9Y5H1 932 aa18.26■□□□□ 0.51
HMGN3-203ENST00000620514 ZNF840PA6NDX5 716 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 ASS1P00966 412 aaKnown RBP18.25■□□□□ 0.51
HMGN3-203ENST00000620514 ASPAP45381 313 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 CCR3P51677 355 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 ZXDBP98169 803 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 TAF10Q12962 218 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 ADAM9Q13443 819 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 CCINQ13939 588 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 DGKKQ5KSL6 1271 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 NAIF1Q69YI7 327 aaPredicted RBP18.25■□□□□ 0.51
HMGN3-203ENST00000620514 INTS8Q75QN2 995 aaKnown RBP18.25■□□□□ 0.51
HMGN3-203ENST00000620514 SUMF1Q8NBK3 374 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 ENGASEQ8NFI3 743 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 ATRIPQ8WXE1 791 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 TAF4BQ92750 862 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 ERCC4Q92889 916 aaPredicted RBP18.25■□□□□ 0.51
HMGN3-203ENST00000620514 EEF2KMTQ96G04 330 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 KCNK16Q96T55 309 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 MED10Q9BTT4 135 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 MMRN2Q9H8L6 949 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 APOBEC3GQ9HC16 384 aaKnown RBP18.25■□□□□ 0.51
HMGN3-203ENST00000620514 DUS2Q9NX74 493 aaKnown RBP18.25■□□□□ 0.51
HMGN3-203ENST00000620514 WNT6Q9Y6F9 365 aa18.25■□□□□ 0.51
HMGN3-203ENST00000620514 LILRB5O75023 590 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 KRT13P13646 458 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 P4HA1P13674 534 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 RPL13P26373 211 aaKnown RBP18.24■□□□□ 0.51
HMGN3-203ENST00000620514 HOXC13P31276 330 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 PSMC2P35998 433 aaKnown RBP18.24■□□□□ 0.51
HMGN3-203ENST00000620514 CXCL12P48061 93 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 NDST1P52848 882 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 PDGFRLQ15198 375 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 FSTL4Q6MZW2 842 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 FUKQ8N0W3 1084 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 SPEM1Q8N4L4 309 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 TAS1R2Q8TE23 839 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 OSCP1Q8WVF1 389 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 TNIP3Q96KP6 325 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 RNF38Q9H0F5 515 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 ARHGAP26Q9UNA1 814 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 GVINP1Q7Z2Y8 2422 aa18.24■□□□□ 0.51
HMGN3-203ENST00000620514 EP300Q09472 2414 aaPredicted RBP18.23■□□□□ 0.51
HMGN3-203ENST00000620514 GOLGA6L4A6NEF3 574 aa18.23■□□□□ 0.51
HMGN3-203ENST00000620514 ABL1P00519 1130 aa18.23■□□□□ 0.51
HMGN3-203ENST00000620514 CCDC130P13994 396 aa18.23■□□□□ 0.51
HMGN3-203ENST00000620514 IFNAR2P48551 515 aa18.23■□□□□ 0.51
HMGN3-203ENST00000620514 DMWDQ09019 674 aa18.23■□□□□ 0.51
HMGN3-203ENST00000620514 PKN3Q6P5Z2 889 aa18.23■□□□□ 0.51
HMGN3-203ENST00000620514 NUP93Q8N1F7 819 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms