RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 FSIP1Q8NA03 581 aa9.36□□□□□ -0.91
TARDBP-222ENST00000620505 TCEAL3Q969E4 200 aa9.36□□□□□ -0.91
TARDBP-222ENST00000620505 CCDC127Q96BQ5 260 aa9.36□□□□□ -0.91
TARDBP-222ENST00000620505 TRMT2BQ96GJ1 504 aaKnown RBP9.36□□□□□ -0.91
TARDBP-222ENST00000620505 CHAMP1Q96JM3 812 aa9.36□□□□□ -0.91
TARDBP-222ENST00000620505 MYRFLQ96LU7 910 aa9.36□□□□□ -0.91
TARDBP-222ENST00000620505 SMPD4Q9NXE4 827 aa9.36□□□□□ -0.91
TARDBP-222ENST00000620505 GCNT4Q9P109 453 aa9.36□□□□□ -0.91
TARDBP-222ENST00000620505 CDH9Q9ULB4 789 aa9.36□□□□□ -0.91
TARDBP-222ENST00000620505 LEFTY2O00292 366 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 STX6O43752 255 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 EPN2O95208 641 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 CST3P01034 146 aaPredicted RBP9.35□□□□□ -0.91
TARDBP-222ENST00000620505 TNNI1P19237 187 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 WARSP23381 471 aaKnown RBP9.35□□□□□ -0.91
TARDBP-222ENST00000620505 GBP1P32455 592 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 MPLP40238 635 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 MAGEA11P43364 429 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 RAP1GAPP47736 663 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 DGKEP52429 567 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 CACNA2D1P54289 1103 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 ZXDBP98169 803 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 SURF1Q15526 300 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 DUOXA2Q1HG44 320 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 C2orf27AQ580R0 203 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 DENND5BQ6ZUT9 1274 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 STXBP4Q6ZWJ1 553 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 TRAPPC11Q7Z392 1133 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 WDR49Q8IV35 697 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 CCDC33Q8N5R6 958 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 OR6B3Q8NGW1 331 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 ATP2A3Q93084 1043 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 ELMO3Q96BJ8 720 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 PCED1BQ96HM7 432 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 FUBP3Q96I24 572 aaKnown RBP eCLIP9.35□□□□□ -0.91
TARDBP-222ENST00000620505 TPSD1Q9BZJ3 242 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 BLZF1Q9H2G9 400 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 SNX25Q9H3E2 840 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 DPEP3Q9H4B8 488 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 ZDHHC4Q9NPG8 344 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 TRPM5Q9NZQ8 1165 aa9.35□□□□□ -0.91
TARDBP-222ENST00000620505 CACNA1AO00555 2505 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 ZNF638Q14966 1978 aaKnown RBP9.34□□□□□ -0.91
TARDBP-222ENST00000620505 SOBPA7XYQ1 873 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 F8VP50 259 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 CLDN5O00501 218 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 KIAA0391O15091 583 aaKnown RBP9.34□□□□□ -0.91
TARDBP-222ENST00000620505 SPTLC2O15270 562 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 TGFB1I1O43294 461 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 APBB3O95704 486 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 ZNF806P0C7X5 589 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 GNL1P36915 607 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-222ENST00000620505 OPRD1P41143 372 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 SLC6A11P48066 632 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 NASPP49321 788 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-222ENST00000620505 CREB5Q02930 508 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 NR1H3Q13133 447 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 E2F4Q16254 413 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 SNRNP35Q16560 246 aaKnown RBP9.34□□□□□ -0.91
TARDBP-222ENST00000620505 PLK5Q496M5 336 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 FBXO43Q4G163 708 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 FAM26FQ5R3K3 315 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 N4BP2L1Q5TBK1 243 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-222ENST00000620505 STPG1Q5TH74 334 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 SYT13Q7L8C5 426 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 DPH6Q7L8W6 267 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 FILIP1Q7Z7B0 1213 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 SFTPA1Q8IWL2 248 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 CAMKK1Q8N5S9 505 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 LINC00301Q8NCQ3 95 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 TSTD1Q8NFU3 115 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 MYCBPAPQ8TBZ2 947 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 SPATA18Q8TC71 538 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 ZNF516Q92618 1163 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 LOXL4Q96JB6 756 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 FNBP1Q96RU3 617 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 CGRRF1Q99675 332 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 TRIM9Q9C026 710 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 ZNF518BQ9C0D4 1074 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 RNF38Q9H0F5 515 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 DUSP15Q9H1R2 295 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-222ENST00000620505 TNMDQ9H2S6 317 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 AGPAT3Q9NRZ7 376 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 KBTBD4Q9NVX7 518 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 NXF1Q9UBU9 619 aaKnown RBP9.34□□□□□ -0.91
TARDBP-222ENST00000620505 ARHGAP26Q9UNA1 814 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 CPQQ9Y646 472 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 DENND4CQ5VZ89 1909 aa9.34□□□□□ -0.91
TARDBP-222ENST00000620505 ATG2BQ96BY7 2078 aa9.33□□□□□ -0.92
TARDBP-222ENST00000620505 CCDC163A0A0D9SF12 145 aa9.33□□□□□ -0.92
TARDBP-222ENST00000620505 ZNF840PA6NDX5 716 aa9.33□□□□□ -0.92
TARDBP-222ENST00000620505 A8MXQ7 604 aa9.33□□□□□ -0.92
TARDBP-222ENST00000620505 K7EQS6 105 aa9.33□□□□□ -0.92
TARDBP-222ENST00000620505 EIF3DO15371 548 aaKnown RBP eCLIP9.33□□□□□ -0.92
TARDBP-222ENST00000620505 PHACTR2O75167 634 aa9.33□□□□□ -0.92
TARDBP-222ENST00000620505 NFATC1O95644 943 aa9.33□□□□□ -0.92
TARDBP-222ENST00000620505 MBL2P11226 248 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-222ENST00000620505 PTPN1P18031 435 aaKnown RBP9.33□□□□□ -0.92
TARDBP-222ENST00000620505 BCKDHBP21953 392 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms