RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 FAM163BP0C2L3 166 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 KRT5P13647 590 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ATF2P15336 505 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 FERP16591 822 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 RPL17P18621 184 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ANXA13P27216 316 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 AVPR2P30518 371 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 GNA15P30679 374 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 CLCN1P35523 988 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 STAT1P42224 750 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ALDH1A3P47895 512 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 TUFMP49411 452 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 PDE6CP51160 858 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 PSMC1P62191 440 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 CCZ1BP86790 482 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 CCZ1P86791 482 aaPredicted RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 CDK17Q00537 523 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ROR1Q01973 937 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ORC1Q13415 861 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 KCNC3Q14003 757 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 MRPL58Q14197 206 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ASIC2Q16515 512 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 SFMBT2Q5VUG0 894 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 C4orf50Q6ZRC1 276 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 TAS1R1Q7RTX1 841 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 IRF2BP2Q7Z5L9 587 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 NOP9Q86U38 636 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ITIH5Q86UX2 942 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 SLC47A2Q86VL8 602 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 GPIHBP1Q8IV16 184 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 SUGP1Q8IWZ8 645 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 DRC7Q8IY82 874 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 PLCD3Q8N3E9 789 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 TDRD5Q8NAT2 981 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 B3GALNT2Q8NCR0 500 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ZNF397Q8NF99 534 aaPredicted RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 VN1R2Q8NFZ6 395 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 OR8K1Q8NGG5 319 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 SLC7A14Q8TBB6 771 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 SPPL2BQ8TCT7 592 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 SLC22A17Q8WUG5 538 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 DDX1Q92499 740 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 SMG7Q92540 1137 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ATOH1Q92858 354 aaPredicted RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 MSLNLQ96KJ4 702 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 SYT15Q9BQS2 421 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 PHF7Q9BWX1 381 aaPredicted RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 NT5C1AQ9BXI3 368 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 RHOBTB2Q9BYZ6 727 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 KCNF1Q9H3M0 494 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 CYP4F11Q9HBI6 524 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ACP6Q9NPH0 428 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 DDX43Q9NXZ2 648 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 EHD2Q9NZN4 543 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 ARHGAP20Q9P2F6 1191 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 HSFX1Q9UBD0 423 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 AFF4Q9UHB7 1163 aaKnown RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 NENFQ9UMX5 172 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 USP15Q9Y4E8 981 aaPredicted RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 PCDHB4Q9Y5E5 795 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 TIMM13Q9Y5L4 95 aaPredicted RBP7.5□□□□□ -1.21
PSMB3-212ENST00000620309 DOCK6Q96HP0 2047 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 NOTCH4Q99466 2003 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 CLUHO75153 1309 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 PKD1L2Q7Z442 2459 aa7.5□□□□□ -1.21
PSMB3-212ENST00000620309 OTOGLQ3ZCN5 2332 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 ATRXP46100 2492 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 SSU72P8A0A1W2PR75 194 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 WDR27A2RRH5 827 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 A8MXQ7 604 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 H0Y858 1186 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 O00370 1275 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 ZNF197O14709 1029 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 CYP26A1O43174 497 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 ZMYND10O75800 440 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 SERPING1P05155 500 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 PLEKP08567 350 aaPredicted RBP7.49□□□□□ -1.21
PSMB3-212ENST00000620309 POU2F2P09086 479 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 CYP11B1P15538 503 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 ACAT1P24752 427 aaKnown RBP7.49□□□□□ -1.21
PSMB3-212ENST00000620309 BRD2P25440 801 aaKnown RBP7.49□□□□□ -1.21
PSMB3-212ENST00000620309 LMO2P25791 158 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 EPHB3P54753 998 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 FMO1Q01740 532 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 PTK2Q05397 1052 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 ADCY1Q08828 1119 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 SIGLEC14Q08ET2 396 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 MAPK8IP2Q13387 824 aaPredicted RBP7.49□□□□□ -1.21
PSMB3-212ENST00000620309 ASTE1Q2TB18 679 aaPredicted RBP7.49□□□□□ -1.21
PSMB3-212ENST00000620309 INTS6LQ5JSJ4 861 aaKnown RBP7.49□□□□□ -1.21
PSMB3-212ENST00000620309 ARHGAP17Q68EM7 881 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 TMC5Q6UXY8 1006 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 OTOP3Q7RTS5 596 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 CCDC186Q7Z3E2 898 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 GPR149Q86SP6 731 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 SPATA2LQ8IUW3 424 aaPredicted RBP7.49□□□□□ -1.21
PSMB3-212ENST00000620309 CRYBG2Q8N1P7 616 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 CCDC112Q8NEF3 446 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 OR6B3Q8NGW1 331 aa7.49□□□□□ -1.21
PSMB3-212ENST00000620309 SLC20A1Q8WUM9 679 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms