RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 ZNF445P59923 1031 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 FAM189BP81408 668 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 ORC2Q13416 577 aaPredicted RBP8.29□□□□□ -1.08
CBWD1-228ENST00000619157 EMC2Q15006 297 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 ZNF761Q86XN6 746 aaPredicted RBP8.29□□□□□ -1.08
CBWD1-228ENST00000619157 IGSF22Q8N9C0 903 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 PRPF31Q8WWY3 499 aaKnown RBP8.29□□□□□ -1.08
CBWD1-228ENST00000619157 FCRL3Q96P31 734 aaPredicted RBP8.29□□□□□ -1.08
CBWD1-228ENST00000619157 TGS1Q96RS0 853 aaKnown RBP8.29□□□□□ -1.08
CBWD1-228ENST00000619157 MAP7D2Q96T17 732 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 YME1L1Q96TA2 773 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 ADAM2Q99965 735 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 MMTAG2Q9BU76 263 aaKnown RBP8.29□□□□□ -1.08
CBWD1-228ENST00000619157 FTHL17Q9BXU8 183 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 SPATA6Q9NWH7 488 aaPredicted RBP8.29□□□□□ -1.08
CBWD1-228ENST00000619157 FBLN5Q9UBX5 448 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 SMC3Q9UQE7 1217 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 ADGRA3Q8IWK6 1321 aa8.29□□□□□ -1.08
CBWD1-228ENST00000619157 GLI4P10075 376 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 FGFR1P11362 822 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 ZNF20P17024 532 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 CDC25AP30304 524 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 SMAD4Q13485 552 aaKnown RBP8.28□□□□□ -1.08
CBWD1-228ENST00000619157 EPC2Q52LR7 807 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 XKR9Q5GH70 373 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 FAM102BQ5T8I3 360 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 CPZQ66K79 652 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 KCNK18Q7Z418 384 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 RHPN2Q8IUC4 686 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 FIBCD1Q8N539 461 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 LRRC15Q8TF66 581 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 PPM1EQ8WY54 764 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 POLR3CQ9BUI4 534 aaPredicted RBP8.28□□□□□ -1.08
CBWD1-228ENST00000619157 SRRTQ9BXP5 876 aaKnown RBP8.28□□□□□ -1.08
CBWD1-228ENST00000619157 GPRC5CQ9NQ84 441 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 NTMQ9P121 344 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 COL4A3BPQ9Y5P4 624 aa8.28□□□□□ -1.08
CBWD1-228ENST00000619157 MRPL42Q9Y6G3 142 aaKnown RBP8.28□□□□□ -1.08
CBWD1-228ENST00000619157 KIAA1671Q9BY89 1806 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 DKC1O60832 514 aaKnown RBP eCLIP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 TP53P04637 393 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 EDN1P05305 212 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 IBSPP21815 317 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 GLRA2P23416 452 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 DNAJB1P25685 340 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 RPA1P27694 616 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 TMOD1P28289 359 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 HOXA11P31270 313 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 L1CAMP32004 1257 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 ARL2P36404 184 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 POLGP54098 1239 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 CORO7P57737 925 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 ATP2C1P98194 919 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 GRIN1Q05586 938 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 LAMTOR4Q0VGL1 99 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 RESTQ13127 1097 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 GNL2Q13823 731 aaKnown RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 CAPSQ13938 189 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 CAMK1Q14012 370 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 PAN2Q504Q3 1202 aaKnown RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 CLLU1OSQ5K130 101 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 AXDND1Q5T1B0 1012 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 LARP1BQ659C4 914 aaKnown RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 FAM173BQ6P4H8 233 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 LRRC55Q6ZSA7 311 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 SLC24A5Q71RS6 500 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 ZNF410Q86VK4 478 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 NEK9Q8TD19 979 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 ZBTB8AQ96BR9 441 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 DHRS1Q96LJ7 313 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 NLRP4Q96MN2 994 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 SCAND2PQ9GZW5 306 aaPredicted RBP8.27□□□□□ -1.09
CBWD1-228ENST00000619157 GP6Q9HCN6 339 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 POLD4Q9HCU8 107 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 TUFT1Q9NNX1 390 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 ANKEF1Q9NU02 776 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 GGT7Q9UJ14 662 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 ATG2AQ2TAZ0 1938 aa8.27□□□□□ -1.09
CBWD1-228ENST00000619157 BRWD1Q9NSI6 2320 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 BDP1A6H8Y1 2624 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 C5orf67F2Z3F1 127 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 H3BNC9 293 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 GRM6O15303 877 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 B4GALT3O60512 393 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 USO1O60763 962 aaKnown RBP8.26□□□□□ -1.09
CBWD1-228ENST00000619157 SRGAP2CP0DJJ0 459 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 SYT1P21579 422 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 BMPR1AP36894 532 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 BTG3Q14201 252 aaPredicted RBP8.26□□□□□ -1.09
CBWD1-228ENST00000619157 RILPL1Q5EBL4 403 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 OTUD6AQ7L8S5 288 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 ECHDC2Q86YB7 292 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 CMTR2Q8IYT2 770 aaKnown RBP8.26□□□□□ -1.09
CBWD1-228ENST00000619157 DAW1Q8N136 415 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 SLC17A8Q8NDX2 589 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 PSPC1Q8WXF1 523 aaKnown RBP8.26□□□□□ -1.09
CBWD1-228ENST00000619157 NKD1Q969G9 470 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 SNX21Q969T3 373 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 CASD1Q96PB1 797 aa8.26□□□□□ -1.09
CBWD1-228ENST00000619157 GCOM2Q9BZD3 368 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms