RNA–Protein interactions for RNA: ENST00000619053.1

AP001059.3-201, humanhuman

BASIC

Gene AP001059.3, Length 235 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001059.3-201ENST00000619053 GCNT4Q9P109 453 aa17.42■□□□□ 0.38
AP001059.3-201ENST00000619053 FBXO4Q9UKT5 387 aa17.42■□□□□ 0.38
AP001059.3-201ENST00000619053 USP34Q70CQ2 3546 aa17.42■□□□□ 0.38
AP001059.3-201ENST00000619053 WDR87Q6ZQQ6 2873 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 STX10O60499 249 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 TRIM49P0CI25 452 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 TRIM49CP0CI26 452 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 EPB41P11171 864 aaKnown RBP17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 TCF3P15923 654 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 ASPAP45381 313 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 RAP1GAPP47736 663 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 GCLMP48507 274 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 KPNA1P52294 538 aaPredicted RBP17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 ZNF528Q3MIS6 628 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 MAML2Q8IZL2 1156 aaPredicted RBP17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 ZFYVE19Q96K21 471 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 TSG101Q99816 390 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 CHRDQ9H2X0 955 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 CYP3A43Q9HB55 503 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 GKN1Q9NS71 199 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 TMEM30AQ9NV96 361 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 SPATA6Q9NWH7 488 aaPredicted RBP17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 TRPM5Q9NZQ8 1165 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 CCL26Q9Y258 94 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 MYOFQ9NZM1 2061 aa17.41■□□□□ 0.38
AP001059.3-201ENST00000619053 SPECC1L-ADORA2AF8WAN1 911 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 SLC16A3O15427 465 aaKnown RBP17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 LAMTOR5O43504 91 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 CLSTN1O94985 981 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 SP9P0CG40 484 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 CCNE1P24864 410 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 CTHP32929 405 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 PPP1R2P41236 205 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 CACNA2D1P54289 1103 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 USP46P62068 366 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 FKBP3Q00688 224 aaKnown RBP17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 LRRC63Q05C16 580 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 INCA1Q0VD86 236 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 ITPRIPL2Q3MIP1 535 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 KRT39Q6A163 491 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 PAQR9Q6ZVX9 377 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 FRMD5Q7Z6J6 570 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 FAM35AQ86V20 835 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 ADSSL1Q8N142 457 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 TAS1R2Q8TE23 839 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 SMARCD1Q96GM5 515 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 GTSE1Q9NYZ3 720 aa17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 NDRG2Q9UN36 371 aaKnown RBP17.4■□□□□ 0.38
AP001059.3-201ENST00000619053 ZNF840PA6NDX5 716 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 CLDN5O00501 218 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 GFRA3O60609 400 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 KINO60870 393 aaKnown RBP17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 RTN3O95197 1032 aaPredicted RBP17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 CKMP06732 381 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 CHRNB1P11230 501 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 HDCP19113 662 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 TRIM21P19474 475 aaKnown RBP17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 NDST1P52848 882 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 USP4Q13107 963 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 PDGFRLQ15198 375 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 ZNF77Q15935 545 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 SPOPLQ6IQ16 392 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 ZC3H14Q6PJT7 736 aaKnown RBP17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 ACOT1Q86TX2 421 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 FUKQ8N0W3 1084 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 NUP93Q8N1F7 819 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 KIAA1958Q8N8K9 716 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 CCDC150Q8NCX0 1101 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 OVCA2Q8WZ82 227 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 NKD2Q969F2 451 aaPredicted RBP17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 ELMO3Q96BJ8 720 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 SLITRK1Q96PX8 696 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 SLC22A12Q96S37 553 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 NIF3L1Q9GZT8 377 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 FAM124BQ9H5Z6 455 aaPredicted RBP17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 LMAN1LQ9HAT1 526 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 APOBEC3GQ9HC16 384 aaKnown RBP17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 TRPC7Q9HCX4 862 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 PRMT8Q9NR22 394 aaPredicted RBP17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 COMMD8Q9NX08 183 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 IL37Q9NZH6 218 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 ARHGAP26Q9UNA1 814 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 KIAA1549LQ6ZVL6 1849 aa17.39■□□□□ 0.37
AP001059.3-201ENST00000619053 C2orf78A6NCI8 922 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 PRR23AA6NEV1 266 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 PSMA7O14818 248 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 MXI1P50539 228 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 TNK2Q07912 1038 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 STIM1Q13586 685 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 RUNX3Q13761 415 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 LRRC32Q14392 662 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 MTF1Q14872 753 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 DGKKQ5KSL6 1271 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 ANKRD40Q6AI12 368 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 CC2D1AQ6P1N0 951 aaPredicted RBP17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 FOXR2Q6PJQ5 311 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 ARL14EPQ8N8R7 260 aaPredicted RBP17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 PDZD8Q8NEN9 1154 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 RIN3Q8TB24 985 aa17.38■□□□□ 0.37
AP001059.3-201ENST00000619053 ERCC4Q92889 916 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms