RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ZSCAN18Q8TBC5 510 aaPredicted RBP8.76□□□□□ -1.01
NEK3-209ENST00000618856 FAM200AQ8TCP9 573 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 SLC2A14Q8TDB8 520 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 OVCA2Q8WZ82 227 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 SMARCD1Q96GM5 515 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 TMEM176AQ96HP8 235 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 KREMEN1Q96MU8 473 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 LRRC3BQ96PB8 259 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 KCNK16Q96T55 309 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 FUCA2Q9BTY2 467 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 HSD3B7Q9H2F3 369 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 ATXN3LQ9H3M9 355 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 DMAP1Q9NPF5 467 aaPredicted RBP8.76□□□□□ -1.01
NEK3-209ENST00000618856 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.76□□□□□ -1.01
NEK3-209ENST00000618856 EHD2Q9NZN4 543 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 GCNT4Q9P109 453 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 UXTQ9UBK9 157 aaPredicted RBP8.76□□□□□ -1.01
NEK3-209ENST00000618856 WDFY4Q6ZS81 3184 aa8.76□□□□□ -1.01
NEK3-209ENST00000618856 ZNF840PA6NDX5 716 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 LRRC10BA6NIK2 292 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 SHISA7A6NL88 538 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 PAEPP09466 180 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 CCDC130P13994 396 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 NPR3P17342 541 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 CD58P19256 250 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 EEF1GP26641 437 aaKnown RBP8.75□□□□□ -1.01
NEK3-209ENST00000618856 GPC5P78333 572 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 CYP4F8P98187 520 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 CETN1Q12798 172 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 ORC1Q13415 861 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 MAN2A1Q16706 1144 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 KLHL40Q2TBA0 621 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 PKDCCQ504Y2 493 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 GPR158Q5T848 1215 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 PPP1R26Q5T8A7 1209 aaPredicted RBP8.75□□□□□ -1.01
NEK3-209ENST00000618856 VITQ6UXI7 678 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 CLEC20AQ6ZU45 233 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 C11orf57Q6ZUT1 292 aaPredicted RBP8.75□□□□□ -1.01
NEK3-209ENST00000618856 HFE2Q6ZVN8 426 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 ARID3BQ8IVW6 561 aaPredicted RBP8.75□□□□□ -1.01
NEK3-209ENST00000618856 ARHGEF19Q8IW93 802 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 FAM114A1Q8IWE2 563 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 SCN4BQ8IWT1 228 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 CMTM8Q8IZV2 173 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 KIAA1958Q8N8K9 716 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 STKLD1Q8NE28 680 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 DEPDC1BQ8WUY9 529 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 KAT5Q92993 513 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 CYFIP2Q96F07 1278 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 NT5C1BQ96P26 610 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 KXD1Q9BQD3 176 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 BPIFA3Q9BQP9 254 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 DDX23Q9BUQ8 820 aaKnown RBP8.75□□□□□ -1.01
NEK3-209ENST00000618856 DUSP16Q9BY84 665 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 INTS2Q9H0H0 1204 aaKnown RBP8.75□□□□□ -1.01
NEK3-209ENST00000618856 ZFP14Q9HCL3 533 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 SIX2Q9NPC8 291 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 SAMSN1Q9NSI8 373 aaKnown RBP8.75□□□□□ -1.01
NEK3-209ENST00000618856 ANO10Q9NW15 660 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 KIAA1257Q9ULG3 409 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 NFE2L3Q9Y4A8 694 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 USP3Q9Y6I4 520 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 ATP8B3O60423 1300 aa8.75□□□□□ -1.01
NEK3-209ENST00000618856 ZNF318Q5VUA4 2279 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 ANAPC1Q9H1A4 1944 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 KRBA1A5PL33 1030 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 FAM86C2PA6NEL3 165 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 HEPACAM2A8MVW5 462 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 RNF225M0QZC1 329 aaPredicted RBP8.74□□□□□ -1.01
NEK3-209ENST00000618856 O00370 1275 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 AP1G2O75843 785 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 RTN3O95197 1032 aaPredicted RBP8.74□□□□□ -1.01
NEK3-209ENST00000618856 PRAMEF12O95522 483 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 OAS1P00973 400 aaKnown RBP8.74□□□□□ -1.01
NEK3-209ENST00000618856 FAM200BP0CF97 657 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 ZNF18P17022 549 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 PSMC3P17980 439 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 PON1P27169 355 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 ANXA13P27216 316 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 VIPR2P41587 438 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 SLC5A3P53794 718 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 STARD6P59095 220 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 YWHAEP62258 255 aaKnown RBP8.74□□□□□ -1.01
NEK3-209ENST00000618856 STX1AQ16623 288 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 VWA3BQ502W6 1294 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 ARHGAP15Q53QZ3 475 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 TCP11X2Q5H9J9 407 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 RAB41Q5JT25 222 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 IER5LQ5T953 404 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 TXNDC8Q6A555 127 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 TRIM65Q6PJ69 517 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 ENOSF1Q7L5Y1 443 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 APTXQ7Z2E3 356 aaKnown RBP8.74□□□□□ -1.01
NEK3-209ENST00000618856 ZNF687Q8N1G0 1237 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 ZNF276Q8N554 614 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 ANKRD52Q8NB46 1076 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 RIN3Q8TB24 985 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 MRPS31Q92665 395 aaKnown RBP8.74□□□□□ -1.01
NEK3-209ENST00000618856 DNASE1L2Q92874 299 aa8.74□□□□□ -1.01
NEK3-209ENST00000618856 USP13Q92995 863 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms