RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 SLC20A1Q8WUM9 679 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 RNF34Q969K3 372 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 ACSF2Q96CM8 615 aaPredicted RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 KREMEN1Q96MU8 473 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 GCNAQ96QF7 691 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 HERC2P3Q9BVR0 1158 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 XPO4Q9C0E2 1151 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SFXN1Q9H9B4 322 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 LRRC4Q9HBW1 653 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 METTL14Q9HCE5 456 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 GMIPQ9P107 970 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SFMBT1Q9UHJ3 866 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 NOTCH4Q99466 2003 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 CAPN9O14815 690 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SYN3O14994 580 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SLC26A4O43511 780 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TSPAN3O60637 253 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 ZMYND10O75800 440 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 VNN2O95498 520 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 MBL2P11226 248 aaPredicted RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 BMP1P13497 986 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 PON1P27169 355 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 ABCD1P33897 745 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 LHX1P48742 406 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TPM4P67936 248 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 UBE3AQ05086 875 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 NME3Q13232 169 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 GPR17Q13304 367 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 MAN2A1Q16706 1144 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 XKR4Q5GH76 650 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 HEATR6Q6AI08 1181 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 RNF135Q8IUD6 432 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 DHX40Q8IX18 779 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SIX5Q8N196 739 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SIX6OS1Q8N1H7 587 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 C1orf131Q8NDD1 294 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 NEK11Q8NG66 645 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 ZNF707Q96C28 371 aaPredicted RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 PIWIL1Q96J94 861 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TNIP3Q96KP6 325 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 RIPOR3Q96MK2 946 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 PRKD2Q9BZL6 878 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FOXQ1Q9C009 403 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 BRD9Q9H8M2 597 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 KCNK12Q9HB15 430 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 RBM12Q9NTZ6 932 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 UBE4BO95155 1302 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 GOLGA8CPA6NN73 597 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 ZNF18P17022 549 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TKTL1P51854 596 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SEC13P55735 322 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SLC8A3P57103 927 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 ATP11AP98196 1134 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FANCCQ00597 558 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 RAB33AQ14088 237 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 ANO4Q32M45 955 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FILIP1LQ4L180 1135 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SGO2Q562F6 1265 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 NAA35Q5VZE5 725 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 OR6B2Q6IFH4 312 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 CC2D1AQ6P1N0 951 aaPredicted RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 HFE2Q6ZVN8 426 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TMC6Q7Z403 805 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 PIGZQ86VD9 579 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FAM114A1Q8IWE2 563 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 NPAS3Q8IXF0 933 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 YAF2Q8IY57 180 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 CCDC33Q8N5R6 958 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 LRRC52Q8N7C0 313 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TRIML1Q8N9V2 468 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 MRPS31Q92665 395 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TMEM176AQ96HP8 235 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 ULBP1Q9BZM6 244 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 SIK2Q9H0K1 926 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 RBSNQ9H1K0 784 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 STIM2Q9P246 746 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 MYO1AQ9UBC5 1043 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 AFF4Q9UHB7 1163 aaKnown RBP4.88□□□□□ -1.63
SYCP1-210ENST00000618516 RASAL2Q9UJF2 1139 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 FBXW11Q9UKB1 542 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 TFR2Q9UP52 801 aa4.88□□□□□ -1.63
SYCP1-210ENST00000618516 VWA8A3KMH1 1905 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 M0QZQ0 153 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 IKBKBO14920 756 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 OAZ2O95190 189 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 PLEKP08567 350 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-210ENST00000618516 UCHL3P15374 230 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 PTPN2P17706 415 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 KPNA1P52294 538 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-210ENST00000618516 NFE2Q16621 373 aaPredicted RBP4.87□□□□□ -1.63
SYCP1-210ENST00000618516 MIIPQ5JXC2 388 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 SLC8B1Q6J4K2 584 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 DENND1BQ6P3S1 775 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 C4orf50Q6ZRC1 276 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 FRMD5Q7Z6J6 570 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 PPFIBP1Q86W92 1011 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 EMC1Q8N766 993 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 SLC4A11Q8NBS3 891 aa4.87□□□□□ -1.63
SYCP1-210ENST00000618516 CXorf38Q8TB03 319 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms