RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.4□□□□□ -0.59
POLR2A-209ENST00000617998 IFT20Q8IY31 132 aa11.4□□□□□ -0.59
POLR2A-209ENST00000617998 ZSCAN18Q8TBC5 510 aaPredicted RBP11.4□□□□□ -0.59
POLR2A-209ENST00000617998 PRCCQ92733 491 aaPredicted RBP11.4□□□□□ -0.59
POLR2A-209ENST00000617998 MTMR6Q9Y217 621 aa11.4□□□□□ -0.59
POLR2A-209ENST00000617998 LRP6O75581 1613 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 RHPN2P1A8MT19 583 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 FGF18O76093 207 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 DARSP14868 501 aaKnown RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 MZF1P28698 734 aaPredicted RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 GFPT1Q06210 699 aaPredicted RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 DRAP1Q14919 205 aaPredicted RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 SLMAPQ14BN4 828 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 LPAL2Q16609 132 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 INSCQ1MX18 579 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 RHOT2Q8IXI1 618 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 SLC20A1Q8WUM9 679 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 CNTNAP5Q8WYK1 1306 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 GUCY1A2P33402 732 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 PLA2G4AP47712 749 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 NRLP54845 237 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 ZNF200P98182 395 aaPredicted RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 BROXQ5VW32 411 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 GPAT2Q6NUI2 795 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 C11orf57Q6ZUT1 292 aaPredicted RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 CROCCP2Q86T23 111 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 NPLOC4Q8TAT6 608 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 SPIRE2Q8WWL2 714 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 KLHL3Q9UH77 587 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 SERPING1P05155 500 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 OR1E1P30953 314 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 TGM3Q08188 693 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 EFCAB3Q8N7B9 438 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 LINC00301Q8NCQ3 95 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 KIAA1143Q96AT1 154 aaPredicted RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 VMP1Q96GC9 406 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 ADGRE3Q9BY15 652 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 SAMSN1Q9NSI8 373 aaKnown RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 ZMYM5Q9UJ78 669 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 PTPRJQ12913 1337 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 SPATA31C2B4DYI2 1134 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 AP3B1O00203 1094 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 SYPP08247 313 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 PSEN1P49768 467 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 BBS9Q3SYG4 887 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 PKN3Q6P5Z2 889 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 SRRM1Q8IYB3 904 aaKnown RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 SPPL2BQ8TCT7 592 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 EDEM1Q92611 657 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 PCDHGB4Q9UN71 923 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 LACTBL1A8MY62 500 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 CYP26A1O43174 497 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 ITGAXP20702 1163 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 GTF2H1P32780 548 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 RWDD2BP57060 319 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 GPC5P78333 572 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 FASTKD1Q53R41 847 aaKnown RBP11.39□□□□□ -0.59
POLR2A-209ENST00000617998 C10orf76Q5T2E6 689 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 TRIB2Q92519 343 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 AGAP3Q96P47 875 aa11.39□□□□□ -0.59
POLR2A-209ENST00000617998 CXCR2P25025 360 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 RAP1GDS1P52306 607 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 ACTN3Q08043 901 aaPredicted RBP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 MFSD5Q6N075 450 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 WDR49Q8IV35 697 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.38□□□□□ -0.592e-7■■□□□ 11.6
POLR2A-209ENST00000617998 TBL1XO60907 577 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 GAD2Q05329 585 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 BST2Q10589 180 aaKnown RBP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 SETDB1Q15047 1291 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 PTCRAQ6ISU1 281 aaPredicted RBP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 CPED1A4D0V7 1026 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 BRAFP15056 766 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 ARRB1P49407 418 aaPredicted RBP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 ROR1Q01973 937 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 TTLL9Q3SXZ7 439 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 GDF6Q6KF10 455 aaPredicted RBP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 ESRP1Q6NXG1 681 aaKnown RBP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 FANCLQ9NW38 375 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 ANXA6P08133 673 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 GPD1P21695 349 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 SNRPD1P62314 119 aaKnown RBP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 CREB5Q02930 508 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 GRB14Q14449 540 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 DENND1CQ8IV53 801 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 CCDC60Q8IWA6 550 aaPredicted RBP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 FAR2Q96K12 515 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 CYP3A43Q9HB55 503 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 PCDHA2Q9Y5H9 948 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 H0YGN5 161 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 CHRNA3P32297 505 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 EHHADHQ08426 723 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 WSCD1Q658N2 575 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 ALKBH2Q6NS38 261 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 TATDN1Q6P1N9 297 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 SNX31Q8N9S9 440 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 TRAIPQ9BWF2 469 aa11.38□□□□□ -0.59
POLR2A-209ENST00000617998 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.38□□□□□ -0.59
POLR2A-209ENST00000617998 GTF2IRD1Q9UHL9 959 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms