RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 LDHAP00338 332 aaKnown RBP12.87□□□□□ -0.35
COL4A2-210ENST00000617564 CAPNS1P04632 268 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 GAP43P17677 238 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 GARTP22102 1010 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 CYP2F1P24903 491 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 GBP1P32455 592 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 PSMD2Q13200 908 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 USP39Q53GS9 565 aaKnown RBP12.87□□□□□ -0.35
COL4A2-210ENST00000617564 L1TD1Q5T7N2 865 aaKnown RBP12.87□□□□□ -0.35
COL4A2-210ENST00000617564 C4orf50Q6ZRC1 276 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 RASSF3Q86WH2 238 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 SPATA2LQ8IUW3 424 aaPredicted RBP12.87□□□□□ -0.35
COL4A2-210ENST00000617564 ADGRF2Q8IZF7 708 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 SH3RF2Q8TEC5 729 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 USP33Q8TEY7 942 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 HNRNPLLQ8WVV9 542 aaKnown RBP12.87□□□□□ -0.35
COL4A2-210ENST00000617564 LRIG1Q96JA1 1093 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 CNOT6LQ96LI5 555 aaKnown RBP12.87□□□□□ -0.35
COL4A2-210ENST00000617564 ACCSQ96QU6 501 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 RBAKQ9NYW8 714 aaPredicted RBP12.87□□□□□ -0.35
COL4A2-210ENST00000617564 GTF3C4Q9UKN8 822 aa12.87□□□□□ -0.35
COL4A2-210ENST00000617564 GABRDO14764 452 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 KHNYNO15037 678 aaKnown RBP12.86□□□□□ -0.35
COL4A2-210ENST00000617564 DCLK1O15075 740 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 PRB1P04280 392 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 PLA2G2AP14555 144 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 ACAT1P24752 427 aaKnown RBP12.86□□□□□ -0.35
COL4A2-210ENST00000617564 WNT7BP56706 349 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 RBP5P82980 135 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 GRIN1Q05586 938 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 ALCAMQ13740 583 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 DPH6Q7L8W6 267 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 CYP2U1Q7Z449 544 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 OSTM1Q86WC4 334 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 ARL14EPQ8N8R7 260 aaPredicted RBP12.86□□□□□ -0.35
COL4A2-210ENST00000617564 CXorf38Q8TB03 319 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 SPATA17Q96L03 361 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 SLC22A12Q96S37 553 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
COL4A2-210ENST00000617564 TMEM9BQ9NQ34 198 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 OLFML3Q9NRN5 406 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 EHD2Q9NZN4 543 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 MMP17Q9ULZ9 603 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 SNX9Q9Y5X1 595 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 MYO16Q9Y6X6 1858 aa12.86□□□□□ -0.35
COL4A2-210ENST00000617564 ATG2BQ96BY7 2078 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 VPS37CA5D8V6 355 aaPredicted RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 C2orf78A6NCI8 922 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 KIAA0391O15091 583 aaKnown RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 TMEM191BP0C7N4 346 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 PDIA4P13667 645 aaKnown RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 HDCP19113 662 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 OPRD1P41143 372 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 MRPS21P82921 87 aaKnown RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 SF3A1Q15459 793 aaKnown RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 MAPRE1Q15691 268 aaKnown RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 HSF5Q4G112 596 aaPredicted RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 FAM171BQ6P995 826 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 VSTM1Q6UX27 236 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 DYMQ7RTS9 669 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 SCN4BQ8IWT1 228 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 CSGALNACT2Q8N6G5 542 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 DEFB124Q8NES8 71 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 SAAL1Q96ER3 474 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 CYP2S1Q96SQ9 504 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 HNRNPABQ99729 332 aaKnown RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 TPSD1Q9BZJ3 242 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 IKZF4Q9H2S9 585 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 EVLQ9UI08 416 aaPredicted RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 CDH9Q9ULB4 789 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 PCDHB13Q9Y5F0 798 aa12.85□□□□□ -0.35
COL4A2-210ENST00000617564 HELZP42694 1942 aaKnown RBP12.85□□□□□ -0.35
COL4A2-210ENST00000617564 K7EQS6 105 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 ALDH1A2O94788 518 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 GCNT3O95395 438 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 KRT19P08727 400 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 SYT1P21579 422 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 EIF2DP41214 584 aaKnown RBP12.84□□□□□ -0.35
COL4A2-210ENST00000617564 DPP6P42658 865 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 PPP3CCP48454 512 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 MYO1EQ12965 1108 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 SOWAHAQ2M3V2 549 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 LMBRD2Q68DH5 695 aaPredicted RBP12.84□□□□□ -0.35
COL4A2-210ENST00000617564 ANO7Q6IWH7 933 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 LIMS2Q7Z4I7 341 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 TTC16Q8NEE8 873 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 OLIG1Q8TAK6 271 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 DNAJC19Q96DA6 116 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 ANKRD36BP1Q96IX9 119 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 SYT15Q9BQS2 421 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 MTMR12Q9C0I1 747 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 TRPM5Q9NZQ8 1165 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 MAGEC2Q9UBF1 373 aaPredicted RBP12.84□□□□□ -0.35
COL4A2-210ENST00000617564 SIX4Q9UIU6 781 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 R3HCC1Q9Y3T6 440 aaKnown RBP12.84□□□□□ -0.35
COL4A2-210ENST00000617564 ANAPC1Q9H1A4 1944 aa12.84□□□□□ -0.35
COL4A2-210ENST00000617564 LEFTY2O00292 366 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms