RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 HLA-DRAP01903 254 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 PNPLA4P41247 253 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 UBASH3AP57075 661 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 SATB1Q01826 763 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 UBXN1Q04323 297 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 FCHO2Q0JRZ9 810 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 GAS6Q14393 721 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 LPAL2Q16609 132 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 SV2CQ496J9 727 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 CBWD6Q4V339 395 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 WDR44Q5JSH3 913 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 CBWD3Q5JTY5 395 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 CBWD5Q5RIA9 395 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 C9orf57Q5W0N0 161 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 C1orf228Q6PIY5 440 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 GBP6Q6ZN66 633 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 YAF2Q8IY57 180 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 CELF5Q8N6W0 485 aaKnown RBP15.85■□□□□ 0.13
UBXN1-218ENST00000616865 FBXL13Q8NEE6 735 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 CNTNAP3BQ96NU0 1288 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 CNTNAP3Q9BZ76 1288 aa15.85■□□□□ 0.13
UBXN1-218ENST00000616865 KIF26AQ9ULI4 1882 aaPredicted RBP15.84■□□□□ 0.13
UBXN1-218ENST00000616865 GOLGA6L3A6NEY3 463 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 LGALS16A8MUM7 142 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 CHADO15335 359 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 ATICP31939 592 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 CXCL12P48061 93 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 TAF6P49848 677 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 MCCD1P59942 119 aaPredicted RBP15.84■□□□□ 0.13
UBXN1-218ENST00000616865 SPEM2Q0P670 501 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 DUSP4Q13115 394 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 GPR17Q13304 367 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 LRRC32Q14392 662 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 SGSM1Q2NKQ1 1148 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 ZNF699Q32M78 642 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 MIIPQ5JXC2 388 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 STXBP5Q5T5C0 1151 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 PRR23BQ6ZRT6 265 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 SPEM1Q8N4L4 309 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 LRRC52Q8N7C0 313 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 TAS1R2Q8TE23 839 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 HPDLQ96IR7 371 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 RAB20Q9NX57 234 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 IFNKQ9P0W0 207 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 GCNT4Q9P109 453 aa15.84■□□□□ 0.13
UBXN1-218ENST00000616865 ANO9A1A5B4 782 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 MTMR11A4FU01 709 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 LRRC10BA6NIK2 292 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 OR6C75A6NL08 312 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 SLC38A8A6NNN8 435 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 LRP3O75074 770 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 PAPSS2O95340 614 aaPredicted RBP15.83■□□□□ 0.12
UBXN1-218ENST00000616865 RETP07949 1114 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 P4HA1P13674 534 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 PAX3P23760 479 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 SOX9P48436 509 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 EPHB3P54753 998 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 MYL6P60660 151 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 TNNC1P63316 161 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 EXOC3L4Q17RC7 722 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 DSTYKQ6XUX3 929 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 TAF4BQ92750 862 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 CRACR2AQ9BSW2 395 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 C8orf33Q9H7E9 229 aaPredicted RBP15.83■□□□□ 0.12
UBXN1-218ENST00000616865 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.122e-8■■■■■ 37.3
UBXN1-218ENST00000616865 RBM12Q9NTZ6 932 aaKnown RBP15.83■□□□□ 0.12
UBXN1-218ENST00000616865 SIX4Q9UIU6 781 aa15.83■□□□□ 0.12
UBXN1-218ENST00000616865 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.83■□□□□ 0.12
UBXN1-218ENST00000616865 MYBPHLA2RUH7 354 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 DCDC2BA2VCK2 349 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 GTPBP10A4D1E9 387 aaKnown RBP15.82■□□□□ 0.12
UBXN1-218ENST00000616865 SPECC1L-ADORA2AF8WAN1 911 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 PIRO00625 290 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 PMM2O15305 246 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 VNN1O95497 513 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 CST3P01034 146 aaPredicted RBP15.82■□□□□ 0.12
UBXN1-218ENST00000616865 TYMPP19971 482 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 CTHP32929 405 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 ALDH1A3P47895 512 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 KPNA1P52294 538 aaPredicted RBP15.82■□□□□ 0.12
UBXN1-218ENST00000616865 ZNF667Q5HYK9 610 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 OVOS1Q6IE37 1185 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 ARID3BQ8IVW6 561 aaPredicted RBP15.82■□□□□ 0.12
UBXN1-218ENST00000616865 EHBP1Q8NDI1 1231 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 NETO1Q8TDF5 533 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 PSMG2Q969U7 264 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 TRIM5Q9C035 493 aa15.82■□□□□ 0.12
UBXN1-218ENST00000616865 INTS2Q9H0H0 1204 aaKnown RBP15.82■□□□□ 0.12
UBXN1-218ENST00000616865 RTN4Q9NQC3 1192 aaKnown RBP15.82■□□□□ 0.12
UBXN1-218ENST00000616865 NXF1Q9UBU9 619 aaKnown RBP15.82■□□□□ 0.12
UBXN1-218ENST00000616865 KPNA7A9QM74 516 aa15.81■□□□□ 0.12
UBXN1-218ENST00000616865 CHURC1-FNTBB4DL54 471 aa15.81■□□□□ 0.12
UBXN1-218ENST00000616865 K7ESF4 209 aa15.81■□□□□ 0.12
UBXN1-218ENST00000616865 PPEF2O14830 753 aa15.81■□□□□ 0.12
UBXN1-218ENST00000616865 CNR2P34972 360 aa15.81■□□□□ 0.12
UBXN1-218ENST00000616865 FNTBP49356 437 aa15.81■□□□□ 0.12
UBXN1-218ENST00000616865 LILRA4P59901 499 aa15.81■□□□□ 0.12
UBXN1-218ENST00000616865 DMWDQ09019 674 aa15.81■□□□□ 0.12
UBXN1-218ENST00000616865 LRMPQ12912 555 aa15.81■□□□□ 0.12
UBXN1-218ENST00000616865 SIM2Q14190 667 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms