RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SKOR1P84550 965 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 SLFN11Q7Z7L1 901 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 TINF2Q9BSI4 451 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 ECT2Q9H8V3 914 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 FNDC3AQ9Y2H6 1198 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 SMAPO00193 183 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 CYB561D2O14569 222 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 DNALI1O14645 258 aaPredicted RBP13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 NCAM1P13591 858 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 KRT4P19013 534 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 ACO1P21399 889 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 RGS2P41220 211 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 BCAT1P54687 386 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 COG7P83436 770 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 PAN2Q504Q3 1202 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 LVRNQ6Q4G3 990 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 WDR75Q8IWA0 830 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 CCDC68Q9H2F9 335 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 PCDH9Q9HC56 1237 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 IPO11Q9UI26 975 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 ADGRA3Q8IWK6 1321 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 PPFIA2O75334 1257 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 B3GAT3O94766 335 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 ASPHQ12797 758 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 PTK6Q13882 451 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 TRPM8Q7Z2W7 1104 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 ZC3H3Q8IXZ2 948 aaKnown RBP13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 ADGRF2Q8IZF7 708 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 BBS5Q8N3I7 341 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 PLEKHO2Q8TD55 490 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 BEGAINQ9BUH8 593 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 RNPEPQ9H4A4 650 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 NINJ2Q9NZG7 142 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 COQ4Q9Y3A0 265 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 MROH7Q68CQ1 1323 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 HMGCRP04035 888 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 PCSK1P29120 753 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 GRIK1P39086 918 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 PDK2Q15119 407 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 TRIM68Q6AZZ1 485 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 LMNTD2Q8IXW0 634 aa13.76□□□□□ -0.21
PPP4R3B-206ENST00000616407 CCDC78A2IDD5 438 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 CCT8L1PA6NM43 557 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 DFFAO00273 331 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 ETS1P14921 441 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 TLK2Q86UE8 772 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 PWWP2AQ96N64 755 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 FSD1LQ9BXM9 530 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 NEUROG2Q9H2A3 272 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 PPCSQ9HAB8 311 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 NCF2P19878 526 aaPredicted RBP13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 SERPINB6P35237 376 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 IQSEC1Q6DN90 963 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 ITPRIPL1Q6GPH6 555 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 CCDC97Q96F63 343 aaPredicted RBP13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 FRMD8P1Q9BZ68 369 aaPredicted RBP13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 SIGLEC16A6NMB1 481 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 AP1G2O75843 785 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 GSTA1P08263 222 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 GSTA2P09210 222 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 ARF4P18085 180 aaPredicted RBP13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 ACAT1P24752 427 aaKnown RBP13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 MUM1Q2TAK8 710 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 KDELC2Q7Z4H8 507 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 ZNF410Q86VK4 478 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 SPATA2LQ8IUW3 424 aaPredicted RBP13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 MCUQ8NE86 351 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 ALKBH8Q96BT7 664 aaKnown RBP13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 PGM2Q96G03 612 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 FIS1Q9Y3D6 152 aa13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 TIMM13Q9Y5L4 95 aaPredicted RBP13.75□□□□□ -0.21
PPP4R3B-206ENST00000616407 RECQL4O94761 1208 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 THPOP40225 353 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 ACTN3Q08043 901 aaPredicted RBP13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 CNGA2Q16280 664 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 C15orf59Q2T9L4 293 aaPredicted RBP13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 CPNE8Q86YQ8 564 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 SLITRK1Q96PX8 696 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 TUBB6Q9BUF5 446 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 NPHS2Q9NP85 383 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 AP4E1Q9UPM8 1137 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 NAV1Q8NEY1 1877 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 AGPSO00116 658 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 HAUS5O94927 633 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 MMP8P22894 467 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 MAP2K2P36507 400 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 BEX3Q00994 111 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 PDK1Q15118 436 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 DCLK2Q8N568 766 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 URGCPQ8TCY9 931 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 APOBEC3GQ9HC16 384 aaKnown RBP13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 CHD4Q14839 1912 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 GPC4O75487 556 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 MFSD10Q14728 455 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 ZNF516Q92618 1163 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 NUDCD1Q96RS6 583 aa13.74□□□□□ -0.21
PPP4R3B-206ENST00000616407 LTBP4Q8N2S1 1624 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms