RNA–Protein interactions for RNA: ENST00000616000.4

STRA6-222, Transcript of stimulated by retinoic acid 6, human

APPRIS P1 TSL 2 BASIC

Gene STRA6, Length 2,843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRA6-222	ENST00000616000	ZACN	Q401N2	412 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	EAPP	Q56P03	285 aa	Predicted RBP	13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	IZUMO2	Q6UXV1	221 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	SPATA24	Q86W54	205 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	ZNF677	Q86XU0	584 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	MCEE	Q96PE7	176 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	OCEL1	Q9H607	264 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	METTL5	Q9NRN9	209 aa	Known RBP	13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	SLC17A7	Q9P2U7	560 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	ZNF70	Q9UC06	446 aa	Predicted RBP	13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	COL11A2	P13942	1736 aa	Predicted RBP	13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	CFAP69	A5D8W1	941 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	ALOX15B	O15296	676 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	ITGA2B	P08514	1039 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	CUL2	Q13617	745 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	DLGAP5	Q15398	846 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	ZNF394	Q53GI3	561 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	SPOCD1	Q6ZMY3	1216 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	NIPA1	Q7RTP0	329 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	DGCR14	Q96DF8	476 aa	Known RBP	13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	CATSPER2	Q96P56	530 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	RMDN3	Q96TC7	470 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	SENP7	Q9BQF6	1050 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	HAPLN2	Q9GZV7	340 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	XPNPEP1	Q9NQW7	623 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	ANKEF1	Q9NU02	776 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	NUB1	Q9Y5A7	615 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	CLUH	O75153	1309 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000	NFASC	O94856	1347 aa		13.84	□□□□□ -0.19
STRA6-222	ENST00000616000		A0A0G2JND7	137 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	C2orf71	A6NGG8	1288 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	SPDYE2B	A6NHP3	402 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	SPDYE6	P0CI01	402 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	LIG4	P49917	911 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	GDF10	P55107	478 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	BPIFB4	P59827	614 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	ASPH	Q12797	758 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	DNAL1	Q4LDG9	190 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	FNBP1L	Q5T0N5	605 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	MAP3K21	Q5TCX8	1036 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	RINL	Q6ZS11	566 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	NLGN1	Q8N2Q7	840 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	DTX3L	Q8TDB6	740 aa		13.83	□□□□□ -0.19
STRA6-222	ENST00000616000	RAD17	O75943	681 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	ZCCHC18	P0CG32	403 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	GLRA2	P23416	452 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	NRL	P54845	237 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	ACTR3	P61158	418 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	CDK18	Q07002	472 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	TBCC	Q15814	346 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	SLC27A3	Q5K4L6	730 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	SWSAP1	Q6NVH7	229 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	CENPU	Q71F23	418 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	LRRC6	Q86X45	466 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	CHSY1	Q86X52	802 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	RCOR2	Q8IZ40	523 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	SAMD3	Q8N6K7	520 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	TCP10L	Q8TDR4	215 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	NTPCR	Q9BSD7	190 aa	Known RBP	13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	PARVA	Q9NVD7	372 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	RABGEF1	Q9UJ41	708 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	CNTNAP1	P78357	1384 aa		13.83	□□□□□ -0.2
STRA6-222	ENST00000616000	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	HARS	P12081	509 aa	Known RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	NEK3	P51956	506 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	ZBTB16	Q05516	673 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	CDC16	Q13042	620 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	SEPT7	Q16181	437 aa	Known RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	SMTNL2	Q2TAL5	461 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	SYCP2L	Q5T4T6	812 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	KYAT3	Q6YP21	454 aa	Known RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	PHF13	Q86YI8	300 aa	Predicted RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	OR5B17	Q8NGF7	314 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	FAM151A	Q8WW52	585 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	PDCD2L	Q9BRP1	358 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	WDR83	Q9BRX9	315 aa	Known RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	DEFB129	Q9H1M3	183 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	IP6K2	Q9UHH9	426 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	TCRBV7S3A2	A0A539	114 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	EXTL3	O43909	919 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	PLA2G6	O60733	806 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	TM7SF2	O76062	418 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	FAM163B	P0C2L3	166 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	CPA3	P15088	417 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	JAK3	P52333	1124 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	VCP	P55072	806 aa	Known RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	USP46	P62068	366 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	MORF4L2	Q15014	288 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	OASL	Q15646	514 aa	Known RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	ZNF276	Q8N554	614 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	TIMMDC1	Q9NPL8	285 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	G3BP2	Q9UN86	482 aa	Known RBP	13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	TMEM191C	A6NGB0	347 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	PFDN1	O60925	122 aa		13.82	□□□□□ -0.2
STRA6-222	ENST00000616000	TMEM191B	P0C7N4	346 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms