RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 MFSD10Q14728 455 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 OTOP1Q7RTM1 612 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 NAT9Q9BTE0 207 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 SCHIP1Q9P0W5 487 aaPredicted RBP15.3■□□□□ 0.04
SNPH-203ENST00000614659 DMGDHQ9UI17 866 aaKnown RBP15.3■□□□□ 0.04
SNPH-203ENST00000614659 SESN2P58004 480 aaPredicted RBP15.3■□□□□ 0.04
SNPH-203ENST00000614659 ILF2Q12905 390 aaKnown RBP15.3■□□□□ 0.04
SNPH-203ENST00000614659 ZNF280DQ6N043 979 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 PGBD3Q8N328 593 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 TRIM54Q9BYV2 358 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 PIK3C2AO00443 1686 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 TM9SF1O15321 606 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 CA12O43570 354 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 FAM200BP0CF97 657 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 MYL2P10916 166 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 LCA5Q86VQ0 697 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 ANKRD27Q96NW4 1050 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 CACNA1FO60840 1977 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 KLRC4O43908 158 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 GLI1P08151 1106 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 HNRNPH3P31942 346 aaKnown RBP15.3■□□□□ 0.04
SNPH-203ENST00000614659 PCYT1AP49585 367 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 SPOCD1Q6ZMY3 1216 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 DFFAO00273 331 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 PAX3P23760 479 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 POU5F1BQ06416 359 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 FSCN1Q16658 493 aaKnown RBP15.3■□□□□ 0.04
SNPH-203ENST00000614659 NAPEPLDQ6IQ20 393 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 CATSPERGQ6ZRH7 1159 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 C3orf67Q6ZVT6 689 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 CREG2Q8IUH2 290 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 SLC26A7Q8TE54 656 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 PDCD6IPQ8WUM4 868 aaKnown RBP15.3■□□□□ 0.04
SNPH-203ENST00000614659 SH2D3AQ9BRG2 576 aa15.3■□□□□ 0.04
SNPH-203ENST00000614659 ENO1P06733 434 aaKnown RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 IL10P22301 178 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 RGS7P49802 495 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 EPHB3P54753 998 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 ALDH18A1P54886 795 aaKnown RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 INPP5AQ14642 412 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 CCDC92Q53HC0 331 aaPredicted RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 EFL1Q7Z2Z2 1120 aaKnown RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 TFB1MQ8WVM0 346 aaKnown RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 ADA2Q9NZK5 511 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 SHOC2Q9UQ13 582 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 PCDHA3Q9Y5H8 950 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 TRIM66O15016 1216 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 SLC12A1Q13621 1099 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 PCBP1Q15365 356 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNPH-203ENST00000614659 ABRAQ8N0Z2 381 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 ATP6V0D2Q8N8Y2 350 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 DPP3Q9NY33 737 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 FNDC3AQ9Y2H6 1198 aaKnown RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 ROBO3Q96MS0 1386 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 PIK3CDO00329 1044 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 GLRA3O75311 464 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 TMCC1O94876 653 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 SLITRK3O94933 977 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 PSEN2P49810 448 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 ATN1P54259 1190 aaPredicted RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 PGM5Q15124 567 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 CRY2Q49AN0 593 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 MREGQ8N565 214 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 ATXN2LQ8WWM7 1075 aaKnown RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 CDC42EP4Q9H3Q1 356 aaKnown RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 PCDH9Q9HC56 1237 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 LRRC4BQ9NT99 713 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 PCMTD2Q9NV79 361 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 NCANO14594 1321 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 CYTH3O43739 400 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 LHX1P48742 406 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 KPNA1P52294 538 aaPredicted RBP15.29■□□□□ 0.04
SNPH-203ENST00000614659 NT5DC3Q86UY8 548 aa15.29■□□□□ 0.04
SNPH-203ENST00000614659 E5RI56 91 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 ALDH2P05091 517 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 ZBTB48P10074 688 aaPredicted RBP15.28■□□□□ 0.04
SNPH-203ENST00000614659 GRIK4Q16099 956 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 NFE2Q16621 373 aaPredicted RBP15.28■□□□□ 0.04
SNPH-203ENST00000614659 MCOLN2Q8IZK6 566 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 WNK4Q96J92 1243 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNPH-203ENST00000614659 TRPV2Q9Y5S1 764 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 GOLGA8RI6L899 631 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 ATP9BO43861 1147 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 ATP5BP06576 529 aaKnown RBP15.28■□□□□ 0.04
SNPH-203ENST00000614659 THP07101 528 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 FAM71DQ8N9W8 422 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 EPS8L3Q8TE67 593 aaKnown RBP15.28■□□□□ 0.04
SNPH-203ENST00000614659 USP13Q92995 863 aaPredicted RBP15.28■□□□□ 0.04
SNPH-203ENST00000614659 DCUN1D1Q96GG9 259 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 DCDC2Q9UHG0 476 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 HNRNPH1P31943 449 aaKnown RBP15.28■□□□□ 0.04
SNPH-203ENST00000614659 SLC11A2P49281 568 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 TMC3Q7Z5M5 1100 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 SIK2Q9H0K1 926 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 PRDM16Q9HAZ2 1276 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 PHTF1Q9UMS5 762 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 CDYLQ9Y232 598 aa15.28■□□□□ 0.04
SNPH-203ENST00000614659 IGF2BP3O00425 579 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNPH-203ENST00000614659 EFCAB14O75071 495 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms