RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 LHX5Q9H2C1 402 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 FAM204AQ9H8W3 233 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 STARD7Q9NQZ5 370 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 DDX43Q9NXZ2 648 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 HCSTQ9UBK5 93 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ADAM21Q9UKJ8 722 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 STRIP2Q9ULQ0 834 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PRG3Q9Y2Y8 225 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 NR2E3Q9Y5X4 410 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PTCH2Q9Y6C5 1203 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PDE4DIPQ5VU43 2346 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PODXLO00592 558 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PIAS1O75925 651 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 OR4Q2P0C623 313 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 HPDP32754 393 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 NUMBP49757 651 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 GATMP50440 423 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CACNA2D1P54289 1103 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CDH6P55285 790 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SF3A3Q12874 501 aaKnown RBP eCLIP3.61□□□□□ -1.83
LIG4-205ENST00000614526 PIGHQ14442 188 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 TCEAL1Q15170 157 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 UAP1Q16222 522 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 CA9Q16790 459 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 TIGD5Q53EQ6 642 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PPP1R15BQ5SWA1 713 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 DUPD1Q68J44 220 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 C1orf228Q6PIY5 440 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SPOCD1Q6ZMY3 1216 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ZNF365Q70YC5 407 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PCSK9Q8NBP7 692 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 KLHDC9Q8NEP7 349 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 FAM172AQ8WUF8 416 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 B3GALT6Q96L58 329 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SLITRK1Q96PX8 696 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 TMEM209Q96SK2 561 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 DCLK3Q9C098 648 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 RAB17Q9H0T7 212 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ACBD3Q9H3P7 528 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SEMA4AQ9H3S1 761 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 VRTNQ9H8Y1 702 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 HMX1Q9NP08 348 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.61□□□□□ -1.83
LIG4-205ENST00000614526 RASAL2Q9UJF2 1139 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 USP18Q9UMW8 372 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 HEY1Q9Y5J3 304 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ATP8B3O60423 1300 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 KIAA0100Q14667 2235 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 FOXO6A8MYZ6 492 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 NT5C1B-RDH14C9J2C7 533 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SGK1O00141 431 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 XPOTO43592 962 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 KPNA6O60684 536 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PQBP1O60828 265 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 UPP2O95045 317 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ACSL3O95573 720 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SHBGP04278 402 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CKBP12277 381 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PTPN1P18031 435 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 GPD1P21695 349 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 HOXD10P28358 340 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 HOXC8P31273 242 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 GRK4P32298 578 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CDH5P33151 784 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 CHKAP35790 457 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CETN2P41208 172 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 APLP1P51693 650 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CCL23P55773 120 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ARPP19P56211 112 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 IFFO1Q0D2I5 559 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ADIGQ0VDE8 80 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 NME3Q13232 169 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ZNF268Q14587 947 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 MBTPS1Q14703 1052 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 TERF2Q15554 542 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SV2CQ496J9 727 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CCDC14Q49A88 953 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 DCAF6Q58WW2 860 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CCSAPQ6IQ19 270 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 RTN4RL1Q86UN2 441 aaPredicted RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 PIGZQ86VD9 579 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 FAM131BQ86XD5 332 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 CEP57Q86XR8 500 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 NT5DC4Q86YG4 428 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ZNF280BQ86YH2 543 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 FUKQ8N0W3 1084 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 LRRC52Q8N7C0 313 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 B3GALNT2Q8NCR0 500 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 EXD1Q8NHP7 514 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SLC35F5Q8WV83 523 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PIK3R5Q8WYR1 880 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 SCLYQ96I15 445 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 ZNF560Q96MR9 790 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 DEFB118Q96PH6 123 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 PPP1R10Q96QC0 940 aaKnown RBP3.61□□□□□ -1.83
LIG4-205ENST00000614526 UNC93B1Q9H1C4 597 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 RSAD1Q9HA92 442 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 TMEM30AQ9NV96 361 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 GRHL1Q9NZI5 618 aa3.61□□□□□ -1.83
LIG4-205ENST00000614526 NUDT5Q9UKK9 219 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms