RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	TPR	P12270	2363 aa	Known RBP	11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	PVALEF	A0A1B0GWK0	134 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	ZNF840P	A6NDX5	716 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	TRIM66	O15016	1216 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	OLFM2	O95897	454 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	CST3	P01034	146 aa	Predicted RBP	11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	DLAT	P10515	647 aa	Known RBP	11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	ATIC	P31939	592 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	GNL1	P36915	607 aa	Predicted RBP	11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	GRIK1	P39086	918 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	IFNAR2	P48551	515 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	USP46	P62068	366 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	CLDN10	P78369	228 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	SLC7A9	P82251	487 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	NR1H3	Q13133	447 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	ATL3	Q6DD88	541 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	UNC13D	Q70J99	1090 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	HS2ST1	Q7LGA3	356 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	CD101	Q93033	1021 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	DHX58	Q96C10	678 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	FNBP1	Q96RU3	617 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	MMS19	Q96T76	1030 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	MRPL45	Q9BRJ2	306 aa	Known RBP	11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	XYLT2	Q9H1B5	865 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	SNX25	Q9H3E2	840 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	VRTN	Q9H8Y1	702 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	NME7	Q9Y5B8	376 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	PCDHGA5	Q9Y5G8	931 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	WNT6	Q9Y6F9	365 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	CHD8	Q9HCK8	2581 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	PTPRD	P23468	1912 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	ANAPC1	Q9H1A4	1944 aa		11.88	□□□□□ -0.51
CBWD1-222	ENST00000613508	ZNF638	Q14966	1978 aa	Known RBP	11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	DCDC2B	A2VCK2	349 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	TULP1	O00294	542 aa	Predicted RBP	11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	POLR2D	O15514	142 aa	Known RBP	11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	EPN2	O95208	641 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	NFATC1	O95644	943 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	APBB3	O95704	486 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	PDGFRB	P09619	1106 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	ZNF806	P0C7X5	589 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	PTPN1	P18031	435 aa	Known RBP	11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	TNNI1	P19237	187 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	ANXA13	P27216	316 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	ZXDB	P98169	803 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	CYP27A1	Q02318	531 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	WDR72	Q3MJ13	1102 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	PLA2G2C	Q5R387	149 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	RESP18	Q5W5W9	173 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	NAIF1	Q69YI7	327 aa	Predicted RBP	11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	KBTBD6	Q86V97	674 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	GOLGA5	Q8TBA6	731 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	DDX1	Q92499	740 aa	Known RBP	11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	ZNF516	Q92618	1163 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	ACD	Q96AP0	544 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	ELOVL4	Q9GZR5	314 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	FOXD4L1	Q9NU39	408 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508	TRPM5	Q9NZQ8	1165 aa		11.87	□□□□□ -0.51
CBWD1-222	ENST00000613508		F8VP50	259 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	TM4SF5	O14894	197 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	AXIN1	O15169	862 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	CLIC2	O15247	247 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	OAS1	P00973	400 aa	Known RBP	11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	ADRB1	P08588	477 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	PXN	P49023	591 aa	Predicted RBP	11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	CYP2J2	P51589	502 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	AP3M2	P53677	418 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	TNNC1	P63316	161 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	PSMD2	Q13200	908 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	KNOP1	Q1ED39	458 aa	Known RBP	11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	GAB4	Q2WGN9	574 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	MDH1B	Q5I0G3	518 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	ADGRG2	Q8IZP9	1017 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	RDH13	Q8NBN7	331 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	RPLP0P6	Q8NHW5	317 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	SYAP1	Q96A49	352 aa	Predicted RBP	11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	CCDC127	Q96BQ5	260 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	DUSP9	Q99956	384 aa	Known RBP	11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	LINC00597	Q9H2U6	94 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	TMEM30A	Q9NV96	361 aa		11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508	HELZ	P42694	1942 aa	Known RBP	11.86	□□□□□ -0.51
CBWD1-222	ENST00000613508		K7EQS6	105 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	LEFTY2	O00292	366 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	SLC9A3R1	O14745	358 aa	Predicted RBP	11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	GDF9	O60383	454 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	CCDC192	P0DO97	292 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	ZSCAN22	P10073	491 aa	Predicted RBP	11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	CHRM1	P11229	460 aa	Predicted RBP	11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	OPRD1	P41143	372 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	EIF2D	P41214	584 aa	Known RBP	11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	CACNA2D1	P54289	1103 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	MYL6	P60660	151 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	DMC1	Q14565	340 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	PLK5	Q496M5	336 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	SNX30	Q5VWJ9	437 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	TDRD10	Q5VZ19	366 aa	Known RBP	11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	SLC9A9	Q8IVB4	645 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	NELFCD	Q8IXH7	590 aa		11.85	□□□□□ -0.51
CBWD1-222	ENST00000613508	B3GALNT2	Q8NCR0	500 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms