RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 LRRC42Q9Y546 428 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 ANK1P16157 1881 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 UNC5CO95185 931 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 ATP6V1C1P21283 382 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 ALDH3A1P30838 453 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 PTDSS1P48651 473 aaKnown RBP17.3■□□□□ 0.36
CNOT3-208ENST00000613073 CCNG1P51959 295 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 GRB14Q14449 540 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 MARCH8Q5T0T0 291 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 SPRYD7Q5W111 196 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 CGB2Q6NT52 195 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 MCEEQ96PE7 176 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 NFKBIZQ9BYH8 718 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 CPA4Q9UI42 421 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 SLC45A1Q9Y2W3 748 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 SCINQ9Y6U3 715 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 KAT6AQ92794 2004 aa17.3■□□□□ 0.36
CNOT3-208ENST00000613073 FSCN2O14926 492 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 RIPK2O43353 540 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 MMP3P08254 477 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 RALAP11233 206 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 MPP2Q14168 576 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 KIZQ2M2Z5 673 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 ZNF667Q5HYK9 610 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 PLEKHH3Q7Z736 793 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 KIAA0319LQ8IZA0 1049 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 C2orf69Q8N8R5 385 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 STK32AQ8WU08 396 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 DNAJC9Q8WXX5 260 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 FAM49AQ9H0Q0 323 aaPredicted RBP17.29■□□□□ 0.36
CNOT3-208ENST00000613073 SDCBP2Q9H190 292 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 MYLK2Q9H1R3 596 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 SMYD3Q9H7B4 428 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 GRHL1Q9NZI5 618 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 TJP2Q9UDY2 1190 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 HMGXB4Q9UGU5 601 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 IL18RAPO95256 599 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 CYP1B1Q16678 543 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 SLC10A6Q3KNW5 377 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 DUSP28Q4G0W2 176 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 DENND1BQ6P3S1 775 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 DPH6Q7L8W6 267 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 TMEM35BQ8NCS4 154 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 FAM13CQ8NE31 585 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 EMID1Q96A84 441 aaPredicted RBP17.29■□□□□ 0.36
CNOT3-208ENST00000613073 LENG1Q96BZ8 264 aaPredicted RBP17.29■□□□□ 0.36
CNOT3-208ENST00000613073 RAB3IPQ96QF0 476 aaPredicted RBP17.29■□□□□ 0.36
CNOT3-208ENST00000613073 GORASP1Q9BQQ3 440 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 RRAGCQ9HB90 399 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 WDR35Q9P2L0 1181 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 R3HDM2Q9Y2K5 976 aaKnown RBP17.29■□□□□ 0.36
CNOT3-208ENST00000613073 DOCK3Q8IZD9 2030 aa17.29■□□□□ 0.36
CNOT3-208ENST00000613073 PI4K2BG5E9Z4 385 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 EPHB2P29323 1055 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 TRIP13Q15645 432 aaPredicted RBP17.28■□□□□ 0.36
CNOT3-208ENST00000613073 DCUN1D2Q6PH85 259 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 VSTM1Q6UX27 236 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 ANKS1BQ7Z6G8 1248 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 ZNF467Q7Z7K2 595 aaPredicted RBP17.28■□□□□ 0.36
CNOT3-208ENST00000613073 RHOT1Q8IXI2 618 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 PARK7Q99497 189 aaKnown RBP17.28■□□□□ 0.36
CNOT3-208ENST00000613073 BRCA2P51587 3418 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 PODXLO00592 558 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 DYNC1LI2O43237 492 aaPredicted RBP17.28■□□□□ 0.36
CNOT3-208ENST00000613073 NPTXRO95502 500 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 MCF2P10911 925 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 STX2P32856 288 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 DNAJC24Q6P3W2 148 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 ACSF2Q96CM8 615 aaPredicted RBP17.28■□□□□ 0.36
CNOT3-208ENST00000613073 TWNKQ96RR1 684 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 ABHD16BQ9H3Z7 469 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 METTL5Q9NRN9 209 aaKnown RBP17.28■□□□□ 0.36
CNOT3-208ENST00000613073 LMCD1Q9NZU5 365 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 F8VP50 259 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 GOLGA8SH3BPF8 625 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 SMAPO00193 183 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 TSPAN1O60635 241 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 ECEL1O95672 775 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 POLR2BP30876 1174 aaKnown RBP17.28■□□□□ 0.36
CNOT3-208ENST00000613073 DGKDQ16760 1214 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 FAM187BQ17R55 369 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 CXCL16Q9H2A7 254 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 RNF19AQ9NV58 838 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 PCMTD2Q9NV79 361 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 MTRF1LQ9UGC7 380 aaKnown RBP17.28■□□□□ 0.36
CNOT3-208ENST00000613073 ASB3Q9Y575 518 aa17.28■□□□□ 0.36
CNOT3-208ENST00000613073 OGDHQ02218 1023 aa17.27■□□□□ 0.36
CNOT3-208ENST00000613073 TNFAIP2Q03169 654 aa17.27■□□□□ 0.36
CNOT3-208ENST00000613073 ZNF252P-AS1Q0IIN9 211 aa17.27■□□□□ 0.36
CNOT3-208ENST00000613073 TSNAXIP1Q2TAA8 658 aa17.27■□□□□ 0.36
CNOT3-208ENST00000613073 KAZNQ674X7 775 aa17.27■□□□□ 0.36
CNOT3-208ENST00000613073 ILDR2Q71H61 639 aa17.27■□□□□ 0.36
CNOT3-208ENST00000613073 ARHGAP22Q7Z5H3 698 aa17.27■□□□□ 0.36
CNOT3-208ENST00000613073 LRRC19Q9H756 370 aa17.27■□□□□ 0.36
CNOT3-208ENST00000613073 TMEM191CA6NGB0 347 aa17.27■□□□□ 0.35
CNOT3-208ENST00000613073 CALB1P05937 261 aa17.27■□□□□ 0.35
CNOT3-208ENST00000613073 CCNB1P14635 433 aa17.27■□□□□ 0.35
CNOT3-208ENST00000613073 KRT17Q04695 432 aa17.27■□□□□ 0.35
CNOT3-208ENST00000613073 POU5F1BQ06416 359 aa17.27■□□□□ 0.35
CNOT3-208ENST00000613073 RCN2Q14257 317 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms