RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 FAM200BP0CF97 657 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 SSR1P43307 286 aaKnown RBP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 ACADSBP45954 432 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 CDR1P51861 262 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 SLC6A3Q01959 620 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 CLUL1Q15846 466 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 INTS6LQ5JSJ4 861 aaKnown RBP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 CC2D1AQ6P1N0 951 aaPredicted RBP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 FAM171BQ6P995 826 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 CLEC20AQ6ZU45 233 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 PIGZQ86VD9 579 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 TRIM43Q96BQ3 446 aaPredicted RBP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 NAP1L3Q99457 506 aaPredicted RBP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 RHOXF2Q9BQY4 288 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 AP1M1Q9BXS5 423 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 PRDM5Q9NQX1 630 aaPredicted RBP12.95□□□□□ -0.34
CBWD1-220ENST00000612045 KRT82Q9NSB4 513 aa12.95□□□□□ -0.34
CBWD1-220ENST00000612045 C2CD4BA6NLJ0 364 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 KRIT1O00522 736 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 KIAA0355O15063 1070 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 ALDH2P05091 517 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 LCP1P13796 627 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 TCF4P15884 667 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 ITGB8P26012 769 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 YWHAHQ04917 246 aaPredicted RBP12.94□□□□□ -0.34
CBWD1-220ENST00000612045 TAF5Q15542 800 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 FAM35AQ86V20 835 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 OR10T2Q8NGX3 314 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 MYLPFQ96A32 169 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 PKMYT1Q99640 499 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 PLVAPQ9BX97 442 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 PARD6BQ9BYG5 372 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 HCSTQ9UBK5 93 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 ADAM28Q9UKQ2 775 aa12.94□□□□□ -0.34
CBWD1-220ENST00000612045 GRAP2O75791 330 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 AP1G2O75843 785 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 UPP2O95045 317 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 SLC11A1P49279 550 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 ZNF143P52747 638 aaPredicted RBP12.93□□□□□ -0.34
CBWD1-220ENST00000612045 MAP3K7CLP57077 242 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 TSPY1Q01534 308 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 LRRC38Q5VT99 294 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 KATNAL2Q8IYT4 538 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 LRRC43Q8N309 656 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 CLEC4CQ8WTT0 213 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 RXFP2Q8WXD0 754 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 KCTD13Q8WZ19 329 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.34
CBWD1-220ENST00000612045 TMEM209Q96SK2 561 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
CBWD1-220ENST00000612045 FNDC1Q4ZHG4 1894 aaPredicted RBP12.93□□□□□ -0.34
CBWD1-220ENST00000612045 CCDC188H7C350 402 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 SYN3O14994 580 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 LRCH4O75427 683 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 OAZ2O95190 189 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 GPD1P21695 349 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 GJC1P36383 396 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 FLT3P36888 993 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 SCNN1AP37088 669 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 CACNA2D1P54289 1103 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 ACAP1Q15027 740 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 MAPRE1Q15691 268 aaKnown RBP12.92□□□□□ -0.34
CBWD1-220ENST00000612045 CCDC70Q6NSX1 233 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 TRNP1Q6NT89 227 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 LRRTM3Q86VH5 581 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 ARFGAP1Q8N6T3 406 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 SMARCD1Q96GM5 515 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 PNKPQ96T60 521 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 KRT12Q99456 494 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 SMOQ99835 787 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 TMEM175Q9BSA9 504 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 CNPY3Q9BT09 278 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 LRRC1Q9BTT6 524 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 TMEM30AQ9NV96 361 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 TMLHEQ9NVH6 421 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 ASNSD1Q9NWL6 643 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 MARCH5Q9NX47 278 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 ABHD14A-ACY1A0A1B0GW23 586 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 TARSL2A2RTX5 802 aaKnown RBP12.92□□□□□ -0.34
CBWD1-220ENST00000612045 ZRANB2O95218 330 aaKnown RBP eCLIP12.92□□□□□ -0.34
CBWD1-220ENST00000612045 GALTP07902 379 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 CSF2RAP15509 400 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 RAG1P15918 1043 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 H2AFXP16104 143 aaPredicted RBP12.92□□□□□ -0.34
CBWD1-220ENST00000612045 BCAR1P56945 870 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 ADIGQ0VDE8 80 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 GLE1Q53GS7 698 aaKnown RBP12.92□□□□□ -0.34
CBWD1-220ENST00000612045 MFSD5Q6N075 450 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 SLC26A9Q7LBE3 791 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 ADAT2Q7Z6V5 191 aaKnown RBP12.92□□□□□ -0.34
CBWD1-220ENST00000612045 SLC13A5Q86YT5 568 aaPredicted RBP12.92□□□□□ -0.34
CBWD1-220ENST00000612045 EXD1Q8NHP7 514 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 LRRC4Q9HBW1 653 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 NR2E1Q9Y466 385 aa12.92□□□□□ -0.34
CBWD1-220ENST00000612045 GOLGA6L10A0A0M3HER8 536 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms