RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 WBP2Q969T9 261 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 FAM122AQ96E09 287 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 KCNK16Q96T55 309 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 ARID3AQ99856 593 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 MFSD1Q9H3U5 465 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 THAP9Q9H5L6 903 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 VRTNQ9H8Y1 702 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 METTL14Q9HCE5 456 aaKnown RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 ZFP14Q9HCL3 533 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 SAMSN1Q9NSI8 373 aaKnown RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 GCNT4Q9P109 453 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 ARIH1Q9Y4X5 557 aaPredicted RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 ASB3Q9Y575 518 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 MYO18AQ92614 2054 aaKnown RBP9.23□□□□□ -0.93
SNCA-212ENST00000611107 KIAA1549LQ6ZVL6 1849 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 SDK1Q7Z5N4 2213 aa9.23□□□□□ -0.93
SNCA-212ENST00000611107 PTPRZ1P23471 2315 aaPredicted RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 FAM186AA6NE01 2351 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 F8VP50 259 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 PHACTR2O75167 634 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 LETM1O95202 739 aaPredicted RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 FGFR1OPO95684 399 aaKnown RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 GNA14O95837 355 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 CALCAP01258 141 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 CCDC130P13994 396 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 ARSAP15289 507 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 PSMC3P17980 439 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 PCSK1P29120 753 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 HOXD11P31277 338 aaPredicted RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 GTF2H1P32780 548 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 MAGEA11P43364 429 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 NDST1P52848 882 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 TRPC3Q13507 836 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 GAS6Q14393 721 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 TPD52L1Q16890 204 aaPredicted RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 MIIPQ5JXC2 388 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 KRT39Q6A163 491 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 GPRIN1Q7Z2K8 1008 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 ACOT1Q86TX2 421 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 MFSD6LQ8IWD5 586 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 DHX40Q8IX18 779 aaKnown RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 FUKQ8N0W3 1084 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 ARL14EPQ8N8R7 260 aaPredicted RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 B3GALNT2Q8NCR0 500 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 PJA1Q8NG27 643 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 SCAMP5Q8TAC9 235 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 SPATA18Q8TC71 538 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 C2orf15Q8WU43 125 aaKnown RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 SMOQ99835 787 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 BPIFA3Q9BQP9 254 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 TRMT61BQ9BVS5 477 aaKnown RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 BCO2Q9BYV7 579 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 ELOVL4Q9GZR5 314 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 SNX25Q9H3E2 840 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 SLITRK6Q9H5Y7 841 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 TASP1Q9H6P5 420 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 ABCB6Q9NP58 842 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 LTB4R2Q9NPC1 389 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 HPS4Q9NQG7 708 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 RBM12Q9NTZ6 932 aaKnown RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 POLR3BQ9NW08 1133 aaPredicted RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 GTSE1Q9NYZ3 720 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 MAGEC2Q9UBF1 373 aaPredicted RBP9.22□□□□□ -0.93
SNCA-212ENST00000611107 COQ4Q9Y3A0 265 aa9.22□□□□□ -0.93
SNCA-212ENST00000611107 EML5Q05BV3 1969 aa9.21□□□□□ -0.93
SNCA-212ENST00000611107 KANSL1LA0AUZ9 987 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 FAM170BA6NMN3 283 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 A8MXQ7 604 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 KCNJ18B7U540 433 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 HHLA1C9JL84 531 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 STK25O00506 426 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 TNFRSF10BO14763 440 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 SCAMP3O14828 347 aaKnown RBP9.21□□□□□ -0.94
SNCA-212ENST00000611107 PMM2O15305 246 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 STX10O60499 249 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 ZNF18P17022 549 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 ATICP31939 592 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 TNNC1P63316 161 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 FCHO2Q0JRZ9 810 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 KCNH2Q12809 1159 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 SMARCB1Q12824 385 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 KCNJ12Q14500 433 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 UBXN2BQ14CS0 331 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 NFE2Q16621 373 aaPredicted RBP9.21□□□□□ -0.94
SNCA-212ENST00000611107 ZNF667Q5HYK9 610 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 PHLDB3Q6NSJ2 640 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 ITIH5Q86UX2 942 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 FAM35AQ86V20 835 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 FAM114A1Q8IWE2 563 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 CMTM8Q8IZV2 173 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 LEMD2Q8NC56 503 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 FBXL13Q8NEE6 735 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 MYRFLQ96LU7 910 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 RNF38Q9H0F5 515 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 FBRSL1Q9HCM7 1045 aaKnown RBP9.21□□□□□ -0.94
SNCA-212ENST00000611107 FAM49BQ9NUQ9 324 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 FANCLQ9NW38 375 aa9.21□□□□□ -0.94
SNCA-212ENST00000611107 NDRG2Q9UN36 371 aaKnown RBP9.21□□□□□ -0.94
SNCA-212ENST00000611107 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.21□□□□□ -0.94
SNCA-212ENST00000611107 ZFHX2Q9C0A1 2572 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms