RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 GBA2Q9HCG7 927 aaPredicted RBP5.42□□□□□ -1.54
HDDC2-207ENST00000608532 A1CFQ9NQ94 594 aaKnown RBP5.42□□□□□ -1.54
HDDC2-207ENST00000608532 STK32BQ9NY57 414 aa5.42□□□□□ -1.54
HDDC2-207ENST00000608532 ADAMTS5Q9UNA0 930 aa5.42□□□□□ -1.54
HDDC2-207ENST00000608532 SNX14Q9Y5W7 946 aa5.42□□□□□ -1.54
HDDC2-207ENST00000608532 FRMPD2Q68DX3 1309 aaPredicted RBP5.42□□□□□ -1.54
HDDC2-207ENST00000608532 GOLGA6CA6NDK9 693 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 GOLGA6BA6NDN3 693 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 MYO1FO00160 1098 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 RGS10O43665 173 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 PDE8BO95263 885 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 RASAL1O95294 804 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 MAP4K4O95819 1239 aaPredicted RBP5.41□□□□□ -1.54
HDDC2-207ENST00000608532 PRKCGP05129 697 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 GOLGA6DP0CG33 693 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 LMO1P25800 156 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 ITGA8P53708 1063 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 CACNB3P54284 484 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 CYP4F2P78329 520 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 GRM3Q14832 879 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 C3orf38Q5JPI3 329 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 CACHD1Q5VU97 1274 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 ZDHHC24Q6UX98 284 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 DPY19L3Q6ZPD9 716 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 C14orf80Q86SX3 495 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 CAND1Q86VP6 1230 aaKnown RBP5.41□□□□□ -1.54
HDDC2-207ENST00000608532 IZUMO1Q8IYV9 350 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 FAM156AQ8NDB6 213 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 LRTOMTQ8WZ04 291 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 ANKS1AQ92625 1134 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 DPF1Q92782 380 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 MACROD1Q9BQ69 325 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 GOLGA6AQ9NYA3 693 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 HDAC9Q9UKV0 1011 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 OGDHLQ9ULD0 1010 aa5.41□□□□□ -1.54
HDDC2-207ENST00000608532 ZNF213O14771 459 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 PPM1GO15355 546 aaPredicted RBP5.4□□□□□ -1.54
HDDC2-207ENST00000608532 ATF3P18847 181 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 CNGA2Q16280 664 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 GFOD2Q3B7J2 385 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 L1TD1Q5T7N2 865 aaKnown RBP5.4□□□□□ -1.54
HDDC2-207ENST00000608532 SLC9A4Q6AI14 798 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 DARS2Q6PI48 645 aaKnown RBP5.4□□□□□ -1.54
HDDC2-207ENST00000608532 Q6ZWC4 215 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 SRRM1Q8IYB3 904 aaKnown RBP5.4□□□□□ -1.54
HDDC2-207ENST00000608532 ABHD11Q8NFV4 315 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 DNAJB14Q8TBM8 379 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 SOCS4Q8WXH5 440 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 SPSB4Q96A44 273 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 PPP1R9BQ96SB3 815 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 C17orf80Q9BSJ5 609 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 ZNF287Q9HBT7 754 aa5.4□□□□□ -1.54
HDDC2-207ENST00000608532 TRIM43BA6NCK2 446 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 WIPF3A6NGB9 483 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 LINC01548A6NM66 108 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 H7C4K7 107 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 PYCARD-AS1I3L0S3 204 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 AP4M1O00189 453 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 EXOC3O60645 756 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 SRGAP2O75044 1071 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 DLDP09622 509 aaKnown RBP5.39□□□□□ -1.55
HDDC2-207ENST00000608532 CDK4P11802 303 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 CTGFP29279 349 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 PRKAR1BP31321 381 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 TFF2Q03403 129 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 SLC10A2Q12908 348 aaPredicted RBP5.39□□□□□ -1.55
HDDC2-207ENST00000608532 SRSF7Q16629 238 aaKnown RBP eCLIP5.39□□□□□ -1.55
HDDC2-207ENST00000608532 TBC1D25Q3MII6 688 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 CERCAMQ5T4B2 595 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 PRAMEF17Q5VTA0 474 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 ZNF782Q6ZMW2 699 aaPredicted RBP5.39□□□□□ -1.55
HDDC2-207ENST00000608532 KCTD20Q7Z5Y7 419 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 MICU3Q86XE3 530 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 RP9Q8TA86 221 aaKnown RBP5.39□□□□□ -1.55
HDDC2-207ENST00000608532 CYP2W1Q8TAV3 490 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 TRIM43Q96BQ3 446 aaPredicted RBP5.39□□□□□ -1.55
HDDC2-207ENST00000608532 REPS1Q96D71 796 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 FSD1LQ9BXM9 530 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 LRRC27Q9C0I9 530 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 BHMT2Q9H2M3 363 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 KLHL42Q9P2K6 505 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 AFF4Q9UHB7 1163 aaKnown RBP5.39□□□□□ -1.55
HDDC2-207ENST00000608532 PAXBP1Q9Y5B6 917 aa5.39□□□□□ -1.55
HDDC2-207ENST00000608532 LOC102723971A0A1B0GUV8 181 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 ISM1B1AKI9 464 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 PSMD9O00233 223 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 TPP1O14773 563 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 MGEA5O60502 916 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 NHLRC4P0CG21 123 aaPredicted RBP5.38□□□□□ -1.55
HDDC2-207ENST00000608532 RPS16P62249 146 aaKnown RBP5.38□□□□□ -1.55
HDDC2-207ENST00000608532 E2F1Q01094 437 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 FMO1Q01740 532 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 FOXF2Q12947 444 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 INSCQ1MX18 579 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 SRGAP1Q7Z6B7 1085 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 PNLDC1Q8NA58 520 aaKnown RBP5.38□□□□□ -1.55
HDDC2-207ENST00000608532 SEMA6DQ8NFY4 1073 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 TTC8Q8TAM2 541 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 SLC29A3Q9BZD2 475 aa5.38□□□□□ -1.55
HDDC2-207ENST00000608532 ITGB1BP2Q9UKP3 347 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms