RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 TATDN2Q93075 761 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 TRMT2BQ96GJ1 504 aaKnown RBP15.39■□□□□ 0.05
HDDC2-204ENST00000608295 BCO2Q9BYV7 579 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 TRPV4Q9HBA0 871 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 GTSE1Q9NYZ3 720 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 UXTQ9UBK9 157 aaPredicted RBP15.39■□□□□ 0.05
HDDC2-204ENST00000608295 SIT1Q9Y3P8 196 aa15.39■□□□□ 0.05
HDDC2-204ENST00000608295 KANSL1LA0AUZ9 987 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 FAM170BA6NMN3 283 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 GALR2O43603 387 aaPredicted RBP15.38■□□□□ 0.05
HDDC2-204ENST00000608295 STX10O60499 249 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 BEST1O76090 585 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 GLULP15104 373 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 KPNA1P52294 538 aaPredicted RBP15.38■□□□□ 0.05
HDDC2-204ENST00000608295 PTPN5P54829 565 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 MAP3K7CLP57077 242 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 TAF10Q12962 218 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 PAQR9Q6ZVX9 377 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 CCDC105Q8IYK2 499 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 DTWD2Q8NBA8 298 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 SCAMP5Q8TAC9 235 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 SLC35C1Q96A29 364 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 SMARCD1Q96GM5 515 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 SHDQ96IW2 340 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 LTB4R2Q9NPC1 389 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 DMAP1Q9NPF5 467 aaPredicted RBP15.38■□□□□ 0.05
HDDC2-204ENST00000608295 RAB20Q9NX57 234 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 SMPD4Q9NXE4 827 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 KIAA1468Q9P260 1216 aa15.38■□□□□ 0.05
HDDC2-204ENST00000608295 TRAV19A0A0A6YYK7 116 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 ARSAP15289 507 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 GTF2H1P32780 548 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 SLC5A3P53794 718 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 STARD6P59095 220 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 WDR44Q5JSH3 913 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 PHLDB3Q6NSJ2 640 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 GPRIN1Q7Z2K8 1008 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 MON1AQ86VX9 555 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 ELOA2Q8IYF1 753 aaPredicted RBP15.37■□□□□ 0.05
HDDC2-204ENST00000608295 CELF5Q8N6W0 485 aaKnown RBP15.37■□□□□ 0.05
HDDC2-204ENST00000608295 WHAMMQ8TF30 809 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 ATOH1Q92858 354 aaPredicted RBP15.37■□□□□ 0.05
HDDC2-204ENST00000608295 DNASE1L2Q92874 299 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 FBXO32Q969P5 355 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 SPATA17Q96L03 361 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 CEP63Q96MT8 703 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 SMOQ99835 787 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 NT5C1AQ9BXI3 368 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 GTPBP4Q9BZE4 634 aaKnown RBP15.37■□□□□ 0.05
HDDC2-204ENST00000608295 CLSTN2Q9H4D0 955 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 EBF3Q9H4W6 596 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 TDP1Q9NUW8 608 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 TRPM5Q9NZQ8 1165 aa15.37■□□□□ 0.05
HDDC2-204ENST00000608295 BICDL2A1A5D9 508 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 ARNTLO00327 626 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 CHADO15335 359 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 CILPO75339 1184 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 FAM200BP0CF97 657 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 PPP1R2P41236 205 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 FMO5P49326 533 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 PRKCQQ04759 706 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 FCHO2Q0JRZ9 810 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 INCA1Q0VD86 236 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 ANGPT1Q15389 498 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 HSP90AA4PQ58FG1 418 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 ZNF852Q6ZMS4 543 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 ZMIZ2Q8NF64 920 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 C8orf48Q96LL4 319 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 MYRFLQ96LU7 910 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 SRRTQ9BXP5 876 aaKnown RBP15.36■□□□□ 0.05
HDDC2-204ENST00000608295 NUP62CLQ9H1M0 184 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 GKN1Q9NS71 199 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 CISHQ9NSE2 258 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 GMIPQ9P107 970 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 WNT6Q9Y6F9 365 aa15.36■□□□□ 0.05
HDDC2-204ENST00000608295 F5P12259 2224 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 SHISA7A6NL88 538 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 CALCAP01258 141 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 FAM163BP0C2L3 166 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 USP17L7P0C7H9 530 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 DDX6P26196 483 aaKnown RBP eCLIP15.35■□□□□ 0.054e-8■■■□□ 14.7
HDDC2-204ENST00000608295 YWHAQP27348 245 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 MTF1Q14872 753 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 ARHGAP29Q52LW3 1261 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 TXNDC11Q6PKC3 985 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 UNC93AQ86WB7 457 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 NUP93Q8N1F7 819 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 SH3RF2Q8TEC5 729 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 FAM3CQ92520 227 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 KAT5Q92993 513 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 E2F7Q96AV8 911 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 CYFIP2Q96F07 1278 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 HEXIM2Q96MH2 286 aaKnown RBP15.35■□□□□ 0.05
HDDC2-204ENST00000608295 SLITRK1Q96PX8 696 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 CYP3A43Q9HB55 503 aa15.35■□□□□ 0.05
HDDC2-204ENST00000608295 METTL14Q9HCE5 456 aaKnown RBP15.35■□□□□ 0.05
HDDC2-204ENST00000608295 RBM12Q9NTZ6 932 aaKnown RBP15.35■□□□□ 0.05
HDDC2-204ENST00000608295 SPATA6Q9NWH7 488 aaPredicted RBP15.35■□□□□ 0.05
HDDC2-204ENST00000608295 ATG2BQ96BY7 2078 aa15.34■□□□□ 0.05
HDDC2-204ENST00000608295 SPECC1L-ADORA2AF8WAN1 911 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms