RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 CYFIP2Q96F07 1278 aa17.58■□□□□ 0.4
LINC00240-203ENST00000606878 HEXIM2Q96MH2 286 aaKnown RBP17.58■□□□□ 0.4
LINC00240-203ENST00000606878 HNRNPABQ99729 332 aaKnown RBP17.58■□□□□ 0.4
LINC00240-203ENST00000606878 PRRX2Q99811 253 aa17.58■□□□□ 0.4
LINC00240-203ENST00000606878 TBC1D17Q9HA65 648 aa17.58■□□□□ 0.4
LINC00240-203ENST00000606878 DMAP1Q9NPF5 467 aaPredicted RBP17.58■□□□□ 0.4
LINC00240-203ENST00000606878 TRPV5Q9NQA5 729 aa17.58■□□□□ 0.4
LINC00240-203ENST00000606878 CISHQ9NSE2 258 aa17.58■□□□□ 0.4
LINC00240-203ENST00000606878 THG1LQ9NWX6 298 aaKnown RBP17.58■□□□□ 0.4
LINC00240-203ENST00000606878 HMGXB4Q9UGU5 601 aa17.58■□□□□ 0.4
LINC00240-203ENST00000606878 DACH1Q9UI36 760 aa17.58■□□□□ 0.4
LINC00240-203ENST00000606878 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.58■□□□□ 0.4
LINC00240-203ENST00000606878 CHADO15335 359 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 CCDC130P13994 396 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 HDCP19113 662 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 AOC1P19801 751 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 YWHAQP27348 245 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 STARD6P59095 220 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 USP46P62068 366 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 YWHAEP62258 255 aaKnown RBP17.57■□□□□ 0.4
LINC00240-203ENST00000606878 FCHO2Q0JRZ9 810 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 KCNH2Q12809 1159 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 LRMPQ12912 555 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 MLF2Q15773 248 aaPredicted RBP17.57■□□□□ 0.4
LINC00240-203ENST00000606878 TPD52L1Q16890 204 aaPredicted RBP17.57■□□□□ 0.4
LINC00240-203ENST00000606878 TRIM59Q8IWR1 403 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 BPIFB1Q8TDL5 484 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 WHAMMQ8TF30 809 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 RSPRY1Q96DX4 576 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 SLITRK1Q96PX8 696 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 TWNKQ96RR1 684 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 TTLL2Q9BWV7 592 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 TRPC7Q9HCX4 862 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 FAM49BQ9NUQ9 324 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 TDP1Q9NUW8 608 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 COMMD8Q9NX08 183 aa17.57■□□□□ 0.4
LINC00240-203ENST00000606878 F5P12259 2224 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 TRAV19A0A0A6YYK7 116 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 USP17L7P0C7H9 530 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 FAM200BP0CF97 657 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 TBXAS1P24557 533 aaPredicted RBP17.56■□□□□ 0.4
LINC00240-203ENST00000606878 ADORA2BP29275 332 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 PDE6CP51160 858 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 TAF10Q12962 218 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 CUL2Q13617 745 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 ARHGAP29Q52LW3 1261 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 ZNF394Q53GI3 561 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 IER5LQ5T953 404 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 EHBP1Q8NDI1 1231 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 CSGALNACT1Q8TDX6 532 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 TMEM176AQ96HP8 235 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 LRRC3BQ96PB8 259 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 CYP2S1Q96SQ9 504 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 NELL2Q99435 816 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 SMG9Q9H0W8 520 aaKnown RBP17.56■□□□□ 0.4
LINC00240-203ENST00000606878 KRT82Q9NSB4 513 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 TMEM30AQ9NV96 361 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 SIT1Q9Y3P8 196 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 MUC6Q6W4X9 2439 aa17.56■□□□□ 0.4
LINC00240-203ENST00000606878 KANSL1LA0AUZ9 987 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 ZNF840PA6NDX5 716 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 MAN2B1O00754 1011 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 PI15O43692 258 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 PRAMEF12O95522 483 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 ABL1P00519 1130 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 AFPP02771 609 aaKnown RBP17.55■□□□□ 0.4
LINC00240-203ENST00000606878 PFKLP17858 780 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 ERCC5P28715 1186 aaPredicted RBP17.55■□□□□ 0.4
LINC00240-203ENST00000606878 MAP3K7CLP57077 242 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 PLCB2Q00722 1185 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 IFRD2Q12894 506 aaPredicted RBP17.55■□□□□ 0.4
LINC00240-203ENST00000606878 ZNF268Q14587 947 aaPredicted RBP17.55■□□□□ 0.4
LINC00240-203ENST00000606878 CT47A1Q5JQC4 288 aaPredicted RBP17.55■□□□□ 0.4
LINC00240-203ENST00000606878 TMEM105Q8N8V8 129 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 GPT2Q8TD30 523 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 USP13Q92995 863 aaPredicted RBP17.55■□□□□ 0.4
LINC00240-203ENST00000606878 NT5C1BQ96P26 610 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 SMOQ99835 787 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 KIF9Q9HAQ2 790 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 CSNK1G1Q9HCP0 422 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 HEBP1Q9NRV9 189 aa17.55■□□□□ 0.4
LINC00240-203ENST00000606878 ZNF318Q5VUA4 2279 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 TADA3O75528 432 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 CKMP06732 381 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 GLULP15104 373 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 RAD23BP54727 409 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 CWF19L1Q69YN2 538 aaKnown RBP17.54■□□□□ 0.4
LINC00240-203ENST00000606878 CC2D1AQ6P1N0 951 aaPredicted RBP17.54■□□□□ 0.4
LINC00240-203ENST00000606878 ZNF852Q6ZMS4 543 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 TPRG1Q6ZUI0 275 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 ARL14EPQ8N8R7 260 aaPredicted RBP17.54■□□□□ 0.4
LINC00240-203ENST00000606878 PDZD8Q8NEN9 1154 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 SCAMP5Q8TAC9 235 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 FBXO32Q969P5 355 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 MED15Q96RN5 788 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 ARID3AQ99856 593 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 DDX23Q9BUQ8 820 aaKnown RBP17.54■□□□□ 0.4
LINC00240-203ENST00000606878 FBXO44Q9H4M3 255 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 GKN1Q9NS71 199 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 IL37Q9NZH6 218 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms