RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 KLHL7Q8IXQ5 586 aa22.69■■□□□ 1.22
USP6NL-204ENST00000606752 PIWIL1Q96J94 861 aaKnown RBP22.69■■□□□ 1.22
USP6NL-204ENST00000606752 NRDE2Q9H7Z3 1164 aa22.69■■□□□ 1.22
USP6NL-204ENST00000606752 GOLGA6L10A0A0M3HER8 536 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 C2CD4BA6NLJ0 364 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 TRAPPC3O43617 180 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 ZRANB2O95218 330 aaKnown RBP eCLIP22.68■■□□□ 1.221e-6■■■■■ 42
USP6NL-204ENST00000606752 MCM3P25205 808 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 TTC3P53804 2025 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 BRD3Q15059 726 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 PPP2R5EQ16537 467 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 FAM171BQ6P995 826 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 CLEC20AQ6ZU45 233 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 EXD1Q8NHP7 514 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 ASNSD1Q9NWL6 643 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 PRG3Q9Y2Y8 225 aaPredicted RBP22.68■■□□□ 1.22
USP6NL-204ENST00000606752 NR2E1Q9Y466 385 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 TCF4P15884 667 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 PDGFRAP16234 1089 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 CAPN2P17655 700 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 GPD1P21695 349 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 RFC2P35250 354 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 GATMP50440 423 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 LRRC26Q2I0M4 334 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 INTS6LQ5JSJ4 861 aaKnown RBP22.68■■□□□ 1.22
USP6NL-204ENST00000606752 CNKSR3Q6P9H4 555 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 FAM35AQ86V20 835 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 ARFGAP1Q8N6T3 406 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 HDAC7Q8WUI4 952 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 RXFP2Q8WXD0 754 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 KCTD13Q8WZ19 329 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 KHSRPQ92945 711 aaKnown RBP eCLIP22.68■■□□□ 1.226e-7■■□□□ 14.1
USP6NL-204ENST00000606752 CNPY3Q9BT09 278 aa22.68■■□□□ 1.22
USP6NL-204ENST00000606752 CCDC151A5D8V7 595 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 SART1O43290 800 aaKnown RBP22.67■■□□□ 1.22
USP6NL-204ENST00000606752 LRCH4O75427 683 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 TADA2AO75478 443 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 RNF8O76064 485 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 BEST1O76090 585 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 ALDH2P05091 517 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 LCP1P13796 627 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 CLCN6P51797 869 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 VSNL1P62760 191 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 YWHAHQ04917 246 aaPredicted RBP22.67■■□□□ 1.22
USP6NL-204ENST00000606752 IKBKEQ14164 716 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 POLNQ7Z5Q5 900 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 ADAT2Q7Z6V5 191 aaKnown RBP22.67■■□□□ 1.22
USP6NL-204ENST00000606752 RCOR2Q8IZ40 523 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 RUBCNQ92622 972 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 MRPL9Q9BYD2 267 aaKnown RBP22.67■■□□□ 1.22
USP6NL-204ENST00000606752 KRT82Q9NSB4 513 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 DMGDHQ9UI17 866 aaKnown RBP22.67■■□□□ 1.22
USP6NL-204ENST00000606752 MTUS1Q9ULD2 1270 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 SCN5AQ14524 2016 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 TANC1Q9C0D5 1861 aa22.67■■□□□ 1.22
USP6NL-204ENST00000606752 NRP1O14786 923 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 FSCN2O14926 492 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 GRAP2O75791 330 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 AP1G2O75843 785 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 GJC1P36383 396 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 FLT3P36888 993 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 TAF5Q15542 800 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 MAPRE1Q15691 268 aaKnown RBP22.66■■□□□ 1.22
USP6NL-204ENST00000606752 HADHQ16836 314 aaKnown RBP22.66■■□□□ 1.22
USP6NL-204ENST00000606752 TRNP1Q6NT89 227 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 SLC26A9Q7LBE3 791 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 ARCQ7LC44 396 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 SLITRK6Q9H5Y7 841 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 DDX56Q9NY93 547 aaKnown RBP22.66■■□□□ 1.22
USP6NL-204ENST00000606752 MAP3K7CLP57077 242 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 MRPS25P82663 173 aaKnown RBP22.66■■□□□ 1.22
USP6NL-204ENST00000606752 SLC7A5Q01650 507 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 ATP13A4Q4VNC1 1196 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 NECAB2Q7Z6G3 386 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 OR10T2Q8NGX3 314 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 SMARCD1Q96GM5 515 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 PKMYT1Q99640 499 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 TMEM106CQ9BVX2 250 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 COLEC11Q9BWP8 271 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 UBXN6Q9BZV1 441 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 DDX47Q9H0S4 455 aaKnown RBP22.66■■□□□ 1.22
USP6NL-204ENST00000606752 LRRC4Q9HBW1 653 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 STIM2Q9P246 746 aa22.66■■□□□ 1.22
USP6NL-204ENST00000606752 TBKBP1A7MCY6 615 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 DPYSL4O14531 572 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 OAZ2O95190 189 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 KRT7P08729 469 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 HSPA1AP0DMV8 641 aaKnown RBP22.65■■□□□ 1.22
USP6NL-204ENST00000606752 HSPA1BP0DMV9 641 aaKnown RBP22.65■■□□□ 1.22
USP6NL-204ENST00000606752 PCK1P35558 622 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 CETN2P41208 172 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 TSPY1Q01534 308 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 SLC25A11Q02978 314 aaKnown RBP22.65■■□□□ 1.22
USP6NL-204ENST00000606752 CCDC50Q8IVM0 306 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 CLEC4CQ8WTT0 213 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 MAIP1Q8WWC4 291 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 MYLPFQ96A32 169 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 VWCEQ96DN2 955 aa22.65■■□□□ 1.22
USP6NL-204ENST00000606752 RBM41Q96IZ5 413 aaKnown RBP22.65■■□□□ 1.22
USP6NL-204ENST00000606752 SMOQ99835 787 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms