RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 SP3Q02447 781 aa11.46□□□□□ -0.58
SHANK2-219ENST00000606715 EFEMP1Q12805 493 aa11.46□□□□□ -0.58
SHANK2-219ENST00000606715 CDR2LQ86X02 465 aaPredicted RBP11.46□□□□□ -0.58
SHANK2-219ENST00000606715 FOXP3Q9BZS1 431 aa11.46□□□□□ -0.58
SHANK2-219ENST00000606715 C20orf96Q9NUD7 363 aaPredicted RBP11.46□□□□□ -0.58
SHANK2-219ENST00000606715 DDIT4Q9NX09 232 aa11.46□□□□□ -0.58
SHANK2-219ENST00000606715 VTNP04004 478 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 RHOAP61586 193 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 DSG4Q86SJ6 1040 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 CAMKK1Q8N5S9 505 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 NDE1Q9NXR1 346 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 NSMCE4AQ9NXX6 385 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 WWOXQ9NZC7 414 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 NFKBIL1Q9UBC1 381 aaPredicted RBP11.45□□□□□ -0.58
SHANK2-219ENST00000606715 RPS6KB2Q9UBS0 482 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 ADGRA2Q96PE1 1338 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 SLC15A5A6NIM6 579 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 FAM107AO95990 144 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 TMEM253P0C7T8 217 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 ANXA11P50995 505 aaKnown RBP11.45□□□□□ -0.58
SHANK2-219ENST00000606715 CCDC144BQ3MJ40 725 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 NOL9Q5SY16 702 aaKnown RBP11.45□□□□□ -0.58
SHANK2-219ENST00000606715 PPP1R14AQ96A00 147 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 CDK5RAP1Q96SZ6 601 aaKnown RBP11.45□□□□□ -0.58
SHANK2-219ENST00000606715 UBXN6Q9BZV1 441 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 ZNF518BQ9C0D4 1074 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 SCOCQ9UIL1 159 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 NPTX2P47972 431 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 LHX1P48742 406 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 NFE2Q16621 373 aaPredicted RBP11.45□□□□□ -0.58
SHANK2-219ENST00000606715 PTGISQ16647 500 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 RANBP17Q9H2T7 1088 aaKnown RBP11.45□□□□□ -0.58
SHANK2-219ENST00000606715 RSAD1Q9HA92 442 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.45□□□□□ -0.58
SHANK2-219ENST00000606715 FKBP9O95302 570 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 F9P00740 461 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 CYP3A4P08684 503 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 ADORA2AP29274 412 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 CLCN3P51790 818 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 CDC16Q13042 620 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 NR1I3Q14994 352 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 FKBP9P1Q75LS8 142 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 SPIRE2Q8WWL2 714 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 OXCT2Q9BYC2 517 aaPredicted RBP11.45□□□□□ -0.58
SHANK2-219ENST00000606715 PARD6BQ9BYG5 372 aa11.45□□□□□ -0.58
SHANK2-219ENST00000606715 MED24O75448 989 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 CNTN1Q12860 1018 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 HIF1AQ16665 826 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 PLEKHM3Q6ZWE6 761 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 SLC30A5Q8TAD4 765 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 PPCSQ9HAB8 311 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 KBTBD4Q9NVX7 518 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 DYRK1BQ9Y463 629 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 M0QYT0 321 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 GYG2O15488 501 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 ADCY3O60266 1144 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 VDRP11473 427 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 BOLA3Q53S33 107 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 CENPPQ6IPU0 288 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 CATSPERGQ6ZRH7 1159 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 WDR49Q8IV35 697 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 HPS3Q969F9 1004 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 DDX4Q9NQI0 724 aaKnown RBP11.44□□□□□ -0.58
SHANK2-219ENST00000606715 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.44□□□□□ -0.58
SHANK2-219ENST00000606715 PDZK1P1A8MUH7 402 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 CTSEP14091 401 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 GTF2E2P29084 291 aaKnown RBP11.44□□□□□ -0.58
SHANK2-219ENST00000606715 GPC1P35052 558 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 CUL2Q13617 745 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 VGLL4Q14135 290 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 PCBP1Q15365 356 aaKnown RBP eCLIP11.44□□□□□ -0.58
SHANK2-219ENST00000606715 FNDC3BQ53EP0 1204 aaKnown RBP11.44□□□□□ -0.58
SHANK2-219ENST00000606715 KLHDC7AQ5VTJ3 777 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 HLA-DQA1Q5Y7H0 255 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 SYTL1Q8IYJ3 562 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 ADGRF2Q8IZF7 708 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 BLOC1S5Q8TDH9 187 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 PNMA5Q96PV4 448 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 RUSC1Q9BVN2 902 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 EXO5Q9H790 373 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 PNMA8BQ9ULN7 279 aaPredicted RBP11.44□□□□□ -0.58
SHANK2-219ENST00000606715 TAF6LQ9Y6J9 622 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 FBXO21O94952 628 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 NTRK3Q16288 839 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 CCDC137Q6PK04 289 aaKnown RBP11.44□□□□□ -0.58
SHANK2-219ENST00000606715 FAM47EQ6ZV65 393 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 FAR2Q96K12 515 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 CAMKK2Q96RR4 588 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 RAB6BQ9NRW1 208 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 TRMT6Q9UJA5 497 aaKnown RBP11.44□□□□□ -0.58
SHANK2-219ENST00000606715 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 NAPEPLDQ6IQ20 393 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 GPAT2Q6NUI2 795 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 REPS2Q8NFH8 660 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 C1QTNF7Q9BXJ2 289 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 IL25Q9H293 177 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 DMAP1Q9NPF5 467 aaPredicted RBP11.44□□□□□ -0.58
SHANK2-219ENST00000606715 IL17RBQ9NRM6 502 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 PLAAQ9Y263 795 aa11.44□□□□□ -0.58
SHANK2-219ENST00000606715 PJA2O43164 708 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms