RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 PPP1R26Q5T8A7 1209 aaPredicted RBP15.12■□□□□ 0.01
CTSA-211ENST00000606066 GJB7Q6PEY0 223 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 DENND5BQ6ZUT9 1274 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 PAQR9Q6ZVX9 377 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 GET4Q7L5D6 327 aaPredicted RBP15.12■□□□□ 0.01
CTSA-211ENST00000606066 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 FBXL6Q8N531 539 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 TDRD5Q8NAT2 981 aaKnown RBP15.12■□□□□ 0.01
CTSA-211ENST00000606066 RBBP8NLQ8NC74 664 aaPredicted RBP15.12■□□□□ 0.01
CTSA-211ENST00000606066 FEZF2Q8TBJ5 459 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 RPGRIP1Q96KN7 1286 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 GCNAQ96QF7 691 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 SIX2Q9NPC8 291 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
CTSA-211ENST00000606066 KRT82Q9NSB4 513 aa15.12■□□□□ 0.01
CTSA-211ENST00000606066 UXTQ9UBK9 157 aaPredicted RBP15.12■□□□□ 0.01
CTSA-211ENST00000606066 SLC38A8A6NNN8 435 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 NOL4O94818 638 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 MYL4P12829 197 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 UCHL3P15374 230 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 CDC25CP30307 473 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 GBP2P32456 591 aaPredicted RBP15.11■□□□□ 0.01
CTSA-211ENST00000606066 USP8P40818 1118 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 APBA1Q02410 837 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 TCF15Q12870 199 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 SYCP1Q15431 976 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 SDHAF4Q5VUM1 108 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 SUGP1Q8IWZ8 645 aaKnown RBP15.11■□□□□ 0.01
CTSA-211ENST00000606066 HS6ST3Q8IZP7 471 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 NUP93Q8N1F7 819 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 NEK11Q8NG66 645 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 GPR152Q8TDT2 470 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 SHC3Q92529 594 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 ASIC4Q96FT7 647 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 TRMT2BQ96GJ1 504 aaKnown RBP15.11■□□□□ 0.01
CTSA-211ENST00000606066 ERGIC2Q96RQ1 377 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 GPR88Q9GZN0 384 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 IRF2BPLQ9H1B7 796 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 CSNK1G1Q9HCP0 422 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 HESX1Q9UBX0 185 aa15.11■□□□□ 0.01
CTSA-211ENST00000606066 MAGED2Q9UNF1 606 aaPredicted RBP15.11■□□□□ 0.01
CTSA-211ENST00000606066 A0A1B0GTH6 734 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 RNF225M0QZC1 329 aaPredicted RBP15.1■□□□□ 0.01
CTSA-211ENST00000606066 MED7O43513 233 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 RTN3O95197 1032 aaPredicted RBP15.1■□□□□ 0.01
CTSA-211ENST00000606066 NPR3P17342 541 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 GABRR2P28476 465 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 ZNF132P52740 706 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 NUBP1P53384 320 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 CACNA2D1P54289 1103 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 MAP3K7CLP57077 242 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 FANCCQ00597 558 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 RAPGEF1Q13905 1077 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 PRSS36Q5K4E3 855 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 TMC8Q8IU68 726 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 ANKRD52Q8NB46 1076 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 MYRFLQ96LU7 910 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 KCNK16Q96T55 309 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 PHOX2BQ99453 314 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 LRRC3Q9BY71 257 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 DUSP16Q9BY84 665 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 STK33Q9BYT3 514 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 PNPLA8Q9NP80 782 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 FAM207AQ9NSI2 230 aaPredicted RBP15.1■□□□□ 0.01
CTSA-211ENST00000606066 COMMD8Q9NX08 183 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 GDE1Q9NZC3 331 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 CDH7Q9ULB5 785 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 SIK3Q9Y2K2 1263 aa15.1■□□□□ 0.01
CTSA-211ENST00000606066 MTCL1Q9Y4B5 1905 aaKnown RBP15.09■□□□□ 0.01
CTSA-211ENST00000606066 CFAP54Q96N23 3096 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 TPM3P06753 285 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 HMGA1P17096 107 aaKnown RBP15.09■□□□□ 0.01
CTSA-211ENST00000606066 PPP3CCP48454 512 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 UBASH3AP57075 661 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 BPIFB4P59827 614 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 PTK2Q05397 1052 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 DRAP1Q14919 205 aaPredicted RBP15.09■□□□□ 0.01
CTSA-211ENST00000606066 CNGA2Q16280 664 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 SLC5A9Q2M3M2 681 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 ARHGAP15Q53QZ3 475 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 DPY19L2P1Q6NXN4 242 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 LCLAT1Q6UWP7 414 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 CLEC20AQ6ZU45 233 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 ZDHHC14Q8IZN3 488 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 ITFG1Q8TB96 612 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 FGF13Q92913 245 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 SMOQ99835 787 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 NAA15Q9BXJ9 866 aaKnown RBP15.09■□□□□ 0.01
CTSA-211ENST00000606066 UBXN6Q9BZV1 441 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 ATXN3LQ9H3M9 355 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 ZNF334Q9HCZ1 680 aaPredicted RBP15.09■□□□□ 0.01
CTSA-211ENST00000606066 EPS15L1Q9UBC2 864 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 ZMYM5Q9UJ78 669 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 TSPAN16Q9UKR8 245 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 FHOD1Q9Y613 1164 aa15.09■□□□□ 0.01
CTSA-211ENST00000606066 PTPRZ1P23471 2315 aaPredicted RBP15.08■□□□□ 0
CTSA-211ENST00000606066 A0A1W2PQC6 194 aa15.08■□□□□ 0
CTSA-211ENST00000606066 A0A1W2PRU2 124 aa15.08■□□□□ 0
CTSA-211ENST00000606066 C2CD4DB7Z1M9 353 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms