RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 ZDHHC4Q9NPG8 344 aa16.52■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 ARHGEF4Q9NR80 690 aa16.52■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 DDX43Q9NXZ2 648 aaKnown RBP16.52■□□□□ 0.24
NEDD8-MDP1-204ENST00000605847 OBSL1O75147 1896 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 A0A1W2PQD8 194 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 LEFTY2O00292 366 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 HUS1O60921 280 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PIGRP01833 764 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PNPLA4P41247 253 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 GRIA2P42262 883 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 TNFRSF4P43489 277 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SLC6A11P48066 632 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ACOT2P49753 483 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ATP2C1P98194 919 aaPredicted RBP16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 KDSRQ06136 332 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 C19orf57Q0VDD7 668 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 DHCR24Q15392 516 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 GAB4Q2WGN9 574 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PLEKHG6Q3KR16 790 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 DTHD1Q6ZMT9 781 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 TRMT11Q7Z4G4 463 aaKnown RBP16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SFTPA1Q8IWL2 248 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ADGRG2Q8IZP9 1017 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 GTF3C4Q9UKN8 822 aa16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 TNRC6BQ9UPQ9 1833 aaKnown RBP16.51■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SMG1Q96Q15 3661 aaKnown RBP16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 LAD1O00515 517 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ADAM23O75077 832 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ADH1CP00326 375 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 GNSP15586 552 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PFKLP17858 780 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 KIR2DL1P43626 348 aaPredicted RBP16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 INTS6LQ5JSJ4 861 aaKnown RBP16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ADALQ6DHV7 355 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 TOGARAM2Q6ZUX3 1019 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 NUDT18Q6ZVK8 323 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ADAM32Q8TC27 787 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 HSPA12BQ96MM6 686 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 FAM124BQ9H5Z6 455 aaPredicted RBP16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 TRPM5Q9NZQ8 1165 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SUSD2Q9UGT4 822 aa16.5■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 NPHP3-ACAD11A0A0J9YXS1 232 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ZNF217O75362 1048 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PLA2G4BP0C869 781 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ACAT1P24752 427 aaKnown RBP16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SLC12A3P55017 1021 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 CFAP221Q4G0U5 840 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PREPLQ4J6C6 727 aaPredicted RBP16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SYCP2LQ5T4T6 812 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 TMEM86AQ8N2M4 240 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PDCL2Q8N4E4 241 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 KCTD17Q8N5Z5 321 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 MYCT1Q8N699 235 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ZNF513Q8N8E2 541 aaPredicted RBP16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 TRIML1Q8N9V2 468 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 FUBP3Q96I24 572 aaKnown RBP eCLIP16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PLIN2Q99541 437 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 MMTAG2Q9BU76 263 aaKnown RBP16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 CALCOCO1Q9P1Z2 691 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ODF2LQ9ULJ1 636 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PCNX2A6NKB5 2137 aa16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SETXQ7Z333 2677 aaKnown RBP16.49■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 A0A0A0MRY4 1105 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 TBC1D3BA6NDS4 549 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 NDUFS2O75306 463 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 FAM13AO94988 1023 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ADH5P11766 374 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 GABRG2P18507 467 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ABCD1P33897 745 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PRPHP41219 470 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ANAPC15P60006 121 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ZXDBP98169 803 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 MESP2Q0VG99 397 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SLFN12LQ6IEE8 588 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 C12orf40Q86WS4 652 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 KIAA1958Q8N8K9 716 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SETD7Q8WTS6 366 aaKnown RBP16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 KCNN1Q92952 543 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 AGO2Q9UKV8 859 aaKnown RBP16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 L1RE1Q9UN81 338 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 CYP8B1Q9UNU6 501 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PCDHB6Q9Y5E3 794 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PTPRDP23468 1912 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ADAMTS9Q9P2N4 1935 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ANK1P16157 1881 aa16.48■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 IGHV1OR15-9A0A0B4J2B8 117 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SCAMP3O14828 347 aaKnown RBP16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 TRAK2O60296 914 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 GJB3O75712 270 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ABL1P00519 1130 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 HOXB2P14652 356 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 ANXA13P27216 316 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 PCSK1P29120 753 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 GRIK1P39086 918 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 BTBD8Q5XKL5 378 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 SLC39A4Q6P5W5 647 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 RHBDF2Q6PJF5 856 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 C4orf50Q6ZRC1 276 aa16.47■□□□□ 0.23
NEDD8-MDP1-204ENST00000605847 DENND5BQ6ZUT9 1274 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms