RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 ZNF77Q15935 545 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 NFIL3Q16649 462 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 C1orf220Q5T0J3 134 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 SPOPLQ6IQ16 392 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 FAM186BQ8IYM0 893 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 SMYD4Q8IYR2 804 aaPredicted RBP17.43■□□□□ 0.38
TUBE1-206ENST00000603722 ATRIPQ8WXE1 791 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 CCDC34Q96HJ3 373 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 TTLL2Q9BWV7 592 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 ZSCAN32Q9NX65 697 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 EHD2Q9NZN4 543 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 TRPM5Q9NZQ8 1165 aa17.43■□□□□ 0.38
TUBE1-206ENST00000603722 NOP14P78316 857 aaKnown RBP17.42■□□□□ 0.38
TUBE1-206ENST00000603722 NUCB2P80303 420 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 IFRD2Q12894 506 aaPredicted RBP17.42■□□□□ 0.38
TUBE1-206ENST00000603722 ORC1Q13415 861 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 PDGFRLQ15198 375 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 SGSM1Q2NKQ1 1148 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 INTS8Q75QN2 995 aaKnown RBP17.42■□□□□ 0.38
TUBE1-206ENST00000603722 FAM35AQ86V20 835 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 FMR1NBQ8N0W7 255 aaPredicted RBP17.42■□□□□ 0.38
TUBE1-206ENST00000603722 ZBTB44Q8NCP5 570 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 SH3RF2Q8TEC5 729 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 TNIP3Q96KP6 325 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 HINFPQ9BQA5 517 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 MED10Q9BTT4 135 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 MMRN2Q9H8L6 949 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 HMGXB4Q9UGU5 601 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 WNT6Q9Y6F9 365 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 ATP8B3O60423 1300 aa17.42■□□□□ 0.38
TUBE1-206ENST00000603722 TICRRQ7Z2Z1 1910 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 CFAP54Q96N23 3096 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 ZNF840PA6NDX5 716 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 GOLGA6L4A6NEF3 574 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 IKBKBO14920 756 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 MAPK13O15264 365 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 ASS1P00966 412 aaKnown RBP17.41■□□□□ 0.38
TUBE1-206ENST00000603722 HLA-DRAP01903 254 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 TDGF1P13385 188 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 KRT13P13646 458 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 HDCP19113 662 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 RPL13P26373 211 aaKnown RBP17.41■□□□□ 0.38
TUBE1-206ENST00000603722 ASPAP45381 313 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 GCLMP48507 274 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 CCINQ13939 588 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 PPP2R5DQ14738 602 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 ZCWPW2Q504Y3 356 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 DGKKQ5KSL6 1271 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 MAMSTRQ6ZN01 415 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 ACOT1Q86TX2 421 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 SPEM1Q8N4L4 309 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 OSCP1Q8WVF1 389 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 TAF4BQ92750 862 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 NELL1Q92832 810 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 CHFRQ96EP1 664 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 DUS2Q9NX74 493 aaKnown RBP17.41■□□□□ 0.38
TUBE1-206ENST00000603722 ARHGAP26Q9UNA1 814 aa17.41■□□□□ 0.38
TUBE1-206ENST00000603722 NUP210Q8TEM1 1887 aaPredicted RBP17.4■□□□□ 0.38
TUBE1-206ENST00000603722 ABL1P00519 1130 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 CCDC130P13994 396 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 PSMC2P35998 433 aaKnown RBP17.4■□□□□ 0.38
TUBE1-206ENST00000603722 CXCL12P48061 93 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 IFNAR2P48551 515 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 PDE6CP51160 858 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 NDST1P52848 882 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 PPP3CAQ08209 521 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 TAF10Q12962 218 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 ADAM9Q13443 819 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 CPA6Q8N4T0 437 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 SUMF1Q8NBK3 374 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 TAS1R2Q8TE23 839 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 EEF2KMTQ96G04 330 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 KCNK16Q96T55 309 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 FAM126AQ9BYI3 521 aaPredicted RBP17.4■□□□□ 0.38
TUBE1-206ENST00000603722 IMPG2Q9BZV3 1241 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 KRT82Q9NSB4 513 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 RMND1Q9NWS8 449 aa17.4■□□□□ 0.38
TUBE1-206ENST00000603722 LILRB5O75023 590 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 PPP3CCP48454 512 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 ZXDBP98169 803 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 GRSF1Q12849 480 aaKnown RBP eCLIP17.39■□□□□ 0.37
TUBE1-206ENST00000603722 NAIF1Q69YI7 327 aaPredicted RBP17.39■□□□□ 0.37
TUBE1-206ENST00000603722 PAQR9Q6ZVX9 377 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 FUKQ8N0W3 1084 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 NUP93Q8N1F7 819 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 ATP2A3Q93084 1043 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 SMARCD1Q96GM5 515 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 SLITRK1Q96PX8 696 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 ECT2Q9H8V3 914 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 APOBEC3GQ9HC16 384 aaKnown RBP17.39■□□□□ 0.37
TUBE1-206ENST00000603722 DMAP1Q9NPF5 467 aaPredicted RBP17.39■□□□□ 0.37
TUBE1-206ENST00000603722 C2orf42Q9NWW7 574 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 SMG5Q9UPR3 1016 aaKnown RBP17.39■□□□□ 0.37
TUBE1-206ENST00000603722 MIA3Q5JRA6 1907 aa17.39■□□□□ 0.37
TUBE1-206ENST00000603722 PATJQ8NI35 1801 aa17.38■□□□□ 0.37
TUBE1-206ENST00000603722 LEFTY2O00292 366 aa17.38■□□□□ 0.37
TUBE1-206ENST00000603722 AP1G2O75843 785 aa17.38■□□□□ 0.37
TUBE1-206ENST00000603722 TCF3P15923 654 aa17.38■□□□□ 0.37
TUBE1-206ENST00000603722 PFKLP17858 780 aa17.38■□□□□ 0.37
TUBE1-206ENST00000603722 YWHAQP27348 245 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms