RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 NPR3P17342 541 aa23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 EN2P19622 333 aaPredicted RBP23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 IBSPP21815 317 aaPredicted RBP23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 IGFBP6P24592 240 aaPredicted RBP23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 PTPN7P35236 360 aa23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 DHX34Q14147 1143 aaKnown RBP23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 MAPRE1Q15691 268 aaKnown RBP23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 ABI1Q8IZP0 508 aa23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 TBC1D13Q9NVG8 400 aa23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 DMGDHQ9UI17 866 aaKnown RBP23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 LRFN2Q9ULH4 789 aa23.41■■□□□ 1.34
PPFIA3-211ENST00000602848 TULP2O00295 520 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 TRAPPC3O43617 180 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 PHF2O75151 1096 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 ATP2C2O75185 946 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 ACAT1P24752 427 aaKnown RBP23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 TLE2Q04725 743 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 RNASELQ05823 741 aaKnown RBP23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 MDH1BQ5I0G3 518 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 SLC26A9Q7LBE3 791 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 C12orf50Q8NA57 414 aaPredicted RBP23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 HDAC7Q8WUI4 952 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 CRTAC1Q9NQ79 661 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 GDF3Q9NR23 364 aa23.4■■□□□ 1.34
PPFIA3-211ENST00000602848 FAM187AA6NFU0 413 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 PAPSS1O43252 624 aaPredicted RBP23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 RAD51CO43502 376 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 DDHD2O94830 711 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 FAM200BP0CF97 657 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 TKTP29401 623 aaKnown RBP23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 ATN1P54259 1190 aaPredicted RBP23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 EFHC1Q5JVL4 640 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 AADACL2Q6P093 401 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 FAM171BQ6P995 826 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 PAQR9Q6ZVX9 377 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 MED10Q9BTT4 135 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 B3GNT5Q9BYG0 378 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 DDX47Q9H0S4 455 aaKnown RBP23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 EFR3BQ9Y2G0 817 aa23.39■■□□□ 1.33
PPFIA3-211ENST00000602848 LRCH4O75427 683 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 GABBR2O75899 941 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 HEXIM1O94992 359 aaKnown RBP23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 PDGFRAP16234 1089 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 RFC2P35250 354 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 BRCC3P46736 316 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 ODF2Q5BJF6 829 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 KIAA0319Q5VV43 1072 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 ZNF280BQ86YH2 543 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 SCUBE3Q8IX30 993 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 PRELID2Q8N945 189 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 RXFP2Q8WXD0 754 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 MRPL9Q9BYD2 267 aaKnown RBP23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 LRRC19Q9H756 370 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 PCYOX1Q9UHG3 505 aa23.38■■□□□ 1.33
PPFIA3-211ENST00000602848 TANC1Q9C0D5 1861 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 BHMG1C9JSJ3 638 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 FNTAP49354 379 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 SLC7A5Q01650 507 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 TRIM60Q495X7 471 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 INTS6LQ5JSJ4 861 aaKnown RBP23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 BEND6Q5SZJ8 279 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 OVOS1Q6IE37 1185 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 PIGZQ86VD9 579 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 CRIPAKQ8N1N5 446 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 EMC1Q8N766 993 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 OSBPL8Q9BZF1 889 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 NR2E1Q9Y466 385 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 TIMM13Q9Y5L4 95 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 FBXO21O94952 628 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 RARAP10276 462 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 PTPN9P43378 593 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 SLC25A11Q02978 314 aaKnown RBP23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 SIX1Q15475 284 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 NPAS4Q8IUM7 802 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 CCDC50Q8IVM0 306 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 KHSRPQ92945 711 aaKnown RBP eCLIP23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 MAGOHBQ96A72 148 aaKnown RBP23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 RTP3Q9BQQ7 232 aa23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 FEZ2Q9UHY8 353 aaPredicted RBP23.37■■□□□ 1.33
PPFIA3-211ENST00000602848 MYBPHLA2RUH7 354 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 KRT1P04264 644 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 GLI1P08151 1106 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 SDC4P31431 198 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 SMC1AQ14683 1233 aaKnown RBP23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 CLEC20AQ6ZU45 233 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 UBE2Q1Q7Z7E8 422 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 FAM35AQ86V20 835 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 ARFGAP1Q8N6T3 406 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 SMARCD1Q96GM5 515 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 PCED1BQ96HM7 432 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 CASD1Q96PB1 797 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 SLITRK1Q96PX8 696 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 RAB17Q9H0T7 212 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 LRRC4Q9HBW1 653 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 CSNK1G1Q9HCP0 422 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 ZNF446Q9NWS9 450 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 AMACRQ9UHK6 382 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 TBX21Q9UL17 535 aa23.36■■□□□ 1.33
PPFIA3-211ENST00000602848 TSPY1Q01534 308 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms