RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 USP25Q9UHP3 1055 aa22.64■■□□□ 1.21
PPFIA3-209ENST00000602783 ATG13O75143 517 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 EGFP01133 1207 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 HDCP19113 662 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 GJA4P35212 333 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 GNL1P36915 607 aaPredicted RBP22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 IFNAR2P48551 515 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 PXNP49023 591 aaPredicted RBP22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 STK4Q13043 487 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 KCNB1Q14721 858 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 KMT5BQ4FZB7 885 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 CPA6Q8N4T0 437 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 OR6B3Q8NGW1 331 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 MYCBPAPQ8TBZ2 947 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 OSCP1Q8WVF1 389 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 PCED1BQ96HM7 432 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 P2RY13Q9BPV8 354 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 SLC8A2Q9UPR5 921 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 WNT6Q9Y6F9 365 aa22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.63■■□□□ 1.21
PPFIA3-209ENST00000602783 RNF40O75150 1001 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 DRD1P21728 446 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 ANXA13P27216 316 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 USP46P62068 366 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 WDR72Q3MJ13 1102 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 MDH1BQ5I0G3 518 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 NAIF1Q69YI7 327 aaPredicted RBP22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 DENND5BQ6ZUT9 1274 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 SH3RF2Q8TEC5 729 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 ZNF516Q92618 1163 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 GZF1Q9H116 711 aaPredicted RBP22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 SEMA4GQ9NTN9 838 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 ATP6V1DQ9Y5K8 247 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 SPTBN2O15020 2390 aa22.62■■□□□ 1.21
PPFIA3-209ENST00000602783 GREB1Q4ZG55 1949 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 NCOR2Q9Y618 2525 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 EXOC3O60645 756 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 LRP3O75074 770 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 TACC1O75410 805 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 FAM163BP0C2L3 166 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 SYKP43405 635 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 NDUFA8P51970 172 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 TNNC1P63316 161 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 USP4Q13107 963 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 TRPC3Q13507 836 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 EML3Q32P44 896 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 FAM160A2Q8N612 972 aaPredicted RBP22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 GOLGA5Q8TBA6 731 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 ATP2A3Q93084 1043 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 EXOC4Q96A65 974 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 CEP295NLQ96MC4 621 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 LINC00597Q9H2U6 94 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 POLR3BQ9NW08 1133 aaPredicted RBP22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 TRPM5Q9NZQ8 1165 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 NME7Q9Y5B8 376 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 ANAPC1Q9H1A4 1944 aa22.61■■□□□ 1.21
PPFIA3-209ENST00000602783 FAM237AA0A1B0GTK4 181 aa22.6■■□□□ 1.21
PPFIA3-209ENST00000602783 TRIM66O15016 1216 aa22.6■■□□□ 1.21
PPFIA3-209ENST00000602783 PTPN1P18031 435 aaKnown RBP22.6■■□□□ 1.21
PPFIA3-209ENST00000602783 PSMD2Q13200 908 aa22.6■■□□□ 1.21
PPFIA3-209ENST00000602783 RTKNQ9BST9 563 aa22.6■■□□□ 1.21
PPFIA3-209ENST00000602783 SCAND2PQ9GZW5 306 aaPredicted RBP22.6■■□□□ 1.21
PPFIA3-209ENST00000602783 ARHGAP26Q9UNA1 814 aa22.6■■□□□ 1.21
PPFIA3-209ENST00000602783 RALGAPA1Q6GYQ0 2036 aa22.6■■□□□ 1.21
PPFIA3-209ENST00000602783 DCDC2BA2VCK2 349 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 F8VP50 259 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 MYL1P05976 194 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 PRR29P0C7W0 189 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 CASP4P49662 377 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 PDE6CP51160 858 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 MYL6P60660 151 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 NR1H3Q13133 447 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 CSRP2Q16527 193 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 FBXO43Q4G163 708 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 PLEKHO2Q8TD55 490 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 CD101Q93033 1021 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 C8orf48Q96LL4 319 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 DPEP3Q9H4B8 488 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 EHD2Q9NZN4 543 aa22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 NXF1Q9UBU9 619 aaKnown RBP22.59■■□□□ 1.21
PPFIA3-209ENST00000602783 CCDC163A0A0D9SF12 145 aa22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 A8MXQ7 604 aa22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 PHACTR2O75167 634 aa22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 RPP40O75818 363 aaKnown RBP22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 RPN1P04843 607 aaKnown RBP22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 TCF3P15923 654 aa22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 PRR23CQ6ZRP0 262 aa22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 GAB3Q8WWW8 586 aa22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 TTLL2Q9BWV7 592 aa22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 KCTD10Q9H3F6 313 aa22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 GOLPH3LQ9H4A5 285 aa22.58■■□□□ 1.21
PPFIA3-209ENST00000602783 HELZP42694 1942 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 A0A1W2PQ27 194 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 A0A1W2PQ64 194 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 A0A1W2PQD8 194 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 AXIN1O15169 862 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 STAU1O95793 577 aaKnown RBP22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 ABL1P00519 1130 aa22.57■■□□□ 1.2
PPFIA3-209ENST00000602783 CCDC192P0DO97 292 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms