RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 Q9H521 79 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 RMND5AQ9H871 391 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 HMG20BQ9P0W2 317 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 PI4KBQ9UBF8 816 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 SUCOQ9UBS9 1254 aaKnown RBP9.23□□□□□ -0.93
COMMD3-215ENST00000602574 VWA7Q9Y334 891 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 RIMBP3CA6NJZ7 1639 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 RIMBP3BA6NNM3 1639 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 RIMBP3Q9UFD9 1639 aa9.23□□□□□ -0.93
COMMD3-215ENST00000602574 CCDC163A0A0D9SF12 145 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 TLDC2A0PJX2 215 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 BTN3A1O00481 513 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 VWA5AO00534 786 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 CES2O00748 559 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 COBLO75128 1261 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 T-ENOLP0DO92 83 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 GAP43P17677 238 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 TALDO1P37837 337 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 ALDH3B2P48448 385 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 ST13P50502 369 aaKnown RBP9.22□□□□□ -0.93
COMMD3-215ENST00000602574 LRRC63Q05C16 580 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 MGAT5Q09328 741 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 AP3B2Q13367 1082 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 TAF12Q16514 161 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 C6orf163Q5TEZ5 329 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 MPRIPQ6WCQ1 1025 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 BTN2A1Q7KYR7 527 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 HAUS6Q7Z4H7 955 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 SLFN11Q7Z7L1 901 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 SYTL1Q8IYJ3 562 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 ZNF579Q8NAF0 562 aaKnown RBP9.22□□□□□ -0.93
COMMD3-215ENST00000602574 XXYLT1Q8NBI6 393 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 LINC00301Q8NCQ3 95 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 SELENOSQ9BQE4 189 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 ISCA1Q9BUE6 129 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 DSCC1Q9BVC3 393 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 GHITMQ9H3K2 345 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 SLITRK6Q9H5Y7 841 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 KCNQ5Q9NR82 932 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 RBM12Q9NTZ6 932 aaKnown RBP9.22□□□□□ -0.93
COMMD3-215ENST00000602574 FGFR1OP2Q9NVK5 253 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 UCKL1Q9NWZ5 548 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 EHD3Q9NZN3 535 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 RNF112Q9ULX5 631 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 SPG7Q9UQ90 795 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 HPSEQ9Y251 543 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 CSNK1G3Q9Y6M4 447 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PTPDC1A2A3K4 754 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PI4K2BG5E9Z4 385 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 RAD51BO15315 384 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PHF2O75151 1096 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 BMP10O95393 424 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PGM3O95394 542 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 NPPAP01160 153 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 NR3C2P08235 984 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PPP1R2P41236 205 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 IARSP41252 1262 aaKnown RBP9.22□□□□□ -0.93
COMMD3-215ENST00000602574 MYL6P60660 151 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 CSTF3Q12996 717 aaKnown RBP9.22□□□□□ -0.93
COMMD3-215ENST00000602574 TSC22D1Q15714 1073 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PPP2R5EQ16537 467 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 TCHHL1Q5QJ38 904 aaPredicted RBP9.22□□□□□ -0.93
COMMD3-215ENST00000602574 DUPD1Q68J44 220 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 TMEM132EQ6IEE7 984 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PPP1R2P3Q6NXS1 205 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 MFSD6Q6ZSS7 791 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 ILDR2Q71H61 639 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 DTX3Q8N9I9 347 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PHOSPHO2Q8TCD6 241 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PI4K2BQ8TCG2 481 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 CKAP2Q8WWK9 683 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 ZUFSPQ96AP4 578 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 DNAJC7Q99615 494 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 C17orf62Q9BQA9 187 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 PAIP1Q9H074 479 aaKnown RBP9.22□□□□□ -0.93
COMMD3-215ENST00000602574 SH3GLB2Q9NR46 395 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 OLFML3Q9NRN5 406 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 SNTG2Q9NY99 539 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 FAM8A1Q9UBU6 413 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 SEPT3Q9UH03 358 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 AMACRQ9UHK6 382 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 RFX7Q2KHR2 1363 aa9.22□□□□□ -0.93
COMMD3-215ENST00000602574 MED1Q15648 1581 aaPredicted RBP9.22□□□□□ -0.93
COMMD3-215ENST00000602574 NPHP3-ACAD11A0A0J9YXS1 232 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 CAPN8A6NHC0 703 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 PRSS44E7EML9 344 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 PSMD11O00231 422 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 CYP17A1P05093 508 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 GFAPP14136 432 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 HOXB3P14651 431 aaPredicted RBP9.21□□□□□ -0.93
COMMD3-215ENST00000602574 ZNF23P17027 643 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 ACAT1P24752 427 aaKnown RBP9.21□□□□□ -0.93
COMMD3-215ENST00000602574 LRPAP1P30533 357 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 IREB2P48200 963 aaKnown RBP9.21□□□□□ -0.93
COMMD3-215ENST00000602574 TRAPPC10P48553 1259 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 AP1S2P56377 157 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 CD300CQ08708 224 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 SSPNQ14714 243 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 MEA1Q16626 185 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms