RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 RNF149Q8NC42 400 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 TRIM9Q9C026 710 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 RRN3Q9NYV6 651 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 FBXO40Q9UH90 709 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 NEU2Q9Y3R4 380 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 C11orf88Q6PI97 169 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 HAUS6Q7Z4H7 955 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 DCUN1D1Q96GG9 259 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 FMO5P49326 533 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 NFIL3Q16649 462 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 L1RE1Q9UN81 338 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 PRLP01236 227 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 SERPIND1P05546 499 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 RGS7P49802 495 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 WDR72Q3MJ13 1102 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 SYDE1Q6ZW31 735 aaPredicted RBP9.02□□□□□ -0.97
CSMD1-216ENST00000602557 RRM2BQ7LG56 351 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 STK33Q9BYT3 514 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 HOXC10Q9NYD6 342 aa9.02□□□□□ -0.97
CSMD1-216ENST00000602557 CLTCQ00610 1675 aaKnown RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 NCKAP1LP55160 1127 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 ABCE1P61221 599 aaKnown RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 PCSK7Q16549 785 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 SGO1Q5FBB7 561 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 TTC39CQ8N584 583 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 TMEM143Q96AN5 459 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF556Q9HAH1 456 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 GALNT8Q9NY28 637 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 ATP6V1HQ9UI12 483 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 EFCAB14O75071 495 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF200P98182 395 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 E2F7Q96AV8 911 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 PIF1Q9H611 641 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 A8MUI8 341 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 PID1Q7Z2X4 250 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 PTPRN2Q92932 1015 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 TSPAN18Q96SJ8 248 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 PHACTR1Q9C0D0 580 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 ACAD9Q9H845 621 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 COPG2Q9UBF2 871 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 GSG1L2A8MUP6 293 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 TRIM49D1C9J1S8 452 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 AKT1P31749 480 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 NNMTP40261 264 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 NCOA4Q13772 614 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 SYTL3Q4VX76 610 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 DEFB107AQ8IZN7 70 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 USP38Q8NB14 1042 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 SPATA18Q8TC71 538 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 REREQ9P2R6 1566 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 ZNF609O15014 1411 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 FAM25AB3EWG3 89 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 FAM25CB3EWG5 89 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 FAM25GB3EWG6 89 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 RGS2P41220 211 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 KLHL12Q53G59 568 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 GATAD2AQ86YP4 633 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 SNX31Q8N9S9 440 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 C18orf8Q96DM3 657 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 RPRD1BQ9NQG5 326 aaKnown RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 RAB6BQ9NRW1 208 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 IMPAD1Q9NX62 359 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 FARP1Q9Y4F1 1045 aaPredicted RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 E9PBE3 544 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 STK25O00506 426 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 PPP3CCP48454 512 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 RNF220Q5VTB9 566 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 MYRFQ9Y2G1 1151 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 RNF17Q9BXT8 1623 aaKnown RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 PGM3O95394 542 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 P4HBP07237 508 aaKnown RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 BGNP21810 368 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 SLC1A1P43005 524 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 GSSP48637 474 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 SNRNP35Q16560 246 aaKnown RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 TSPAN17Q96FV3 270 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 LATS2Q9NRM7 1088 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 CARD8Q9Y2G2 431 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 FAM32AQ9Y421 112 aaKnown RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 USP11P51784 963 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 ADAM17P78536 824 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 MROH9Q5TGP6 573 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 AKAP14Q86UN6 197 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 CYP39A1Q9NYL5 469 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 MYO3AQ8NEV4 1616 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 ABCC3O15438 1527 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 WEE2P0C1S8 567 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 SRBD1Q8N5C6 995 aaKnown RBP9.01□□□□□ -0.97
CSMD1-216ENST00000602557 CTNNAL1Q9UBT7 734 aa9.01□□□□□ -0.97
CSMD1-216ENST00000602557 C3orf70A6NLC5 250 aaPredicted RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 FKBP9O95302 570 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 CSE1LP55060 971 aaKnown RBP9□□□□□ -0.97
CSMD1-216ENST00000602557 MTMR2Q13614 643 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ALX1Q15699 326 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 FKBP9P1Q75LS8 142 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 NECAB2Q7Z6G3 386 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 POU5F2Q8N7G0 328 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ATP8B4Q8TF62 1192 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 ITFG2Q969R8 447 aa9□□□□□ -0.97
CSMD1-216ENST00000602557 NRDE2Q9H7Z3 1164 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms