RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ARHGAP26Q9UNA1 814 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 SLC8A2Q9UPR5 921 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 WDR87Q6ZQQ6 2873 aa18.14■□□□□ 0.49
SCAF1-204ENST00000601038 STAU1O95793 577 aaKnown RBP18.13■□□□□ 0.49
SCAF1-204ENST00000601038 HSP90AA1P07900 732 aaKnown RBP18.13■□□□□ 0.49
SCAF1-204ENST00000601038 AFMP43652 599 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 PPP3CCP48454 512 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 IFNAR2P48551 515 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 TNNC1P63316 161 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 NOP14P78316 857 aaKnown RBP18.13■□□□□ 0.49
SCAF1-204ENST00000601038 NR1H3Q13133 447 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 TRPC3Q13507 836 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 CUL4BQ13620 913 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 EML3Q32P44 896 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 MDH1BQ5I0G3 518 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 HSCBQ8IWL3 235 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 TTC16Q8NEE8 873 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 C8orf48Q96LL4 319 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 TTLL2Q9BWV7 592 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 GZF1Q9H116 711 aaPredicted RBP18.13■□□□□ 0.49
SCAF1-204ENST00000601038 SEMA4GQ9NTN9 838 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 TRPM5Q9NZQ8 1165 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 CFAP45Q9UL16 551 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 NME7Q9Y5B8 376 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 WNT6Q9Y6F9 365 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 FRYLO94915 3013 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 ATG2BQ96BY7 2078 aa18.13■□□□□ 0.49
SCAF1-204ENST00000601038 F8VP50 259 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 EXOC3O60645 756 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 RNF40O75150 1001 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 PTPN1P18031 435 aaKnown RBP18.12■□□□□ 0.49
SCAF1-204ENST00000601038 ATICP31939 592 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 MYL6P60660 151 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 USP46P62068 366 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 CSRP2Q16527 193 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 CAMKK1Q8N5S9 505 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 FAM160A2Q8N612 972 aaPredicted RBP18.12■□□□□ 0.49
SCAF1-204ENST00000601038 GAB3Q8WWW8 586 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 CD101Q93033 1021 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 XYLT2Q9H1B5 865 aa18.12■□□□□ 0.49
SCAF1-204ENST00000601038 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.12■□□□□ 0.49
SCAF1-204ENST00000601038 PTPRDP23468 1912 aa18.11■□□□□ 0.49
SCAF1-204ENST00000601038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.11■□□□□ 0.49
SCAF1-204ENST00000601038 ZNF840PA6NDX5 716 aa18.11■□□□□ 0.49
SCAF1-204ENST00000601038 NAIF1Q69YI7 327 aaPredicted RBP18.11■□□□□ 0.49
SCAF1-204ENST00000601038 CEP57L1Q8IYX8 460 aa18.11■□□□□ 0.49
SCAF1-204ENST00000601038 KIAA1958Q8N8K9 716 aa18.11■□□□□ 0.49
SCAF1-204ENST00000601038 GOLGA5Q8TBA6 731 aa18.11■□□□□ 0.49
SCAF1-204ENST00000601038 NETO1Q8TDF5 533 aa18.11■□□□□ 0.49
SCAF1-204ENST00000601038 SYAP1Q96A49 352 aaPredicted RBP18.11■□□□□ 0.49
SCAF1-204ENST00000601038 LINC00597Q9H2U6 94 aa18.11■□□□□ 0.49
SCAF1-204ENST00000601038 NXF1Q9UBU9 619 aaKnown RBP18.11■□□□□ 0.49
SCAF1-204ENST00000601038 RCOR1Q9UKL0 485 aa18.11■□□□□ 0.49
SCAF1-204ENST00000601038 RALGAPA1Q6GYQ0 2036 aa18.11■□□□□ 0.49
SCAF1-204ENST00000601038 A8MXQ7 604 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 FOXD2O60548 495 aaPredicted RBP18.1■□□□□ 0.49
SCAF1-204ENST00000601038 PHACTR2O75167 634 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 RPP40O75818 363 aaKnown RBP18.1■□□□□ 0.49
SCAF1-204ENST00000601038 SLFN14P0C7P3 912 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 PXNP49023 591 aaPredicted RBP18.1■□□□□ 0.49
SCAF1-204ENST00000601038 AP3M2P53677 418 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 SLC7A9P82251 487 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 ZXDBP98169 803 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 TDRD10Q5VZ19 366 aaKnown RBP18.1■□□□□ 0.49
SCAF1-204ENST00000601038 PRR23CQ6ZRP0 262 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 B3GALNT2Q8NCR0 500 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 LOXL4Q96JB6 756 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 ELOVL4Q9GZR5 314 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 DPEP3Q9H4B8 488 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 VRTNQ9H8Y1 702 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 SERTAD1Q9UHV2 236 aa18.1■□□□□ 0.49
SCAF1-204ENST00000601038 LEFTY2O00292 366 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 KLRC4O43908 158 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 NFATC1O95644 943 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 OLFM2O95897 454 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 CASP4P49662 377 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 CLDN10P78369 228 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 DNM1Q05193 864 aaKnown RBP18.09■□□□□ 0.49
SCAF1-204ENST00000601038 TAF10Q12962 218 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 PSMD2Q13200 908 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 PKP1Q13835 747 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 SYT13Q7L8C5 426 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 CACNA2D4Q7Z3S7 1137 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 GRAMD1CQ8IYS0 662 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 RPLP0P6Q8NHW5 317 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 CCDC26Q8TAB7 109 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 PLEKHO2Q8TD55 490 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 PARD3BQ8TEW8 1205 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 TMEM174Q8WUU8 243 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 EZH1Q92800 747 aaPredicted RBP18.09■□□□□ 0.49
SCAF1-204ENST00000601038 SLITRK1Q96PX8 696 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 B3GNT5Q9BYG0 378 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 ZNF518BQ9C0D4 1074 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 RNF38Q9H0F5 515 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 TMEM30AQ9NV96 361 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 DMAC2Q9NW81 257 aa18.09■□□□□ 0.49
SCAF1-204ENST00000601038 SDK1Q7Z5N4 2213 aa18.08■□□□□ 0.49
SCAF1-204ENST00000601038 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.08■□□□□ 0.48
SCAF1-204ENST00000601038 DCDC2BA2VCK2 349 aa18.08■□□□□ 0.48
SCAF1-204ENST00000601038 SLC30A4O14863 429 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms