RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ARMCX6Q7L4S7 300 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 LPCAT2Q7L5N7 544 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 DYMQ7RTS9 669 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 FILIP1Q7Z7B0 1213 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 TMEFF1Q8IYR6 380 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 ADGRG2Q8IZP9 1017 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 ALLCQ8N6M5 410 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 IL17RCQ8NAC3 791 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 TXNDC5Q8NBS9 432 aaKnown RBP17.95■□□□□ 0.46
USE1-208ENST00000600970 SAAL1Q96ER3 474 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 SPATA17Q96L03 361 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 SLC32A1Q9H598 525 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 RBAKQ9NYW8 714 aaPredicted RBP17.95■□□□□ 0.46
USE1-208ENST00000600970 MAGEC2Q9UBF1 373 aaPredicted RBP17.95■□□□□ 0.46
USE1-208ENST00000600970 MBD1Q9UIS9 605 aaPredicted RBP17.95■□□□□ 0.46
USE1-208ENST00000600970 SIX4Q9UIU6 781 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 ITGA11Q9UKX5 1188 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 CIZ1Q9ULV3 898 aaPredicted RBP17.95■□□□□ 0.46
USE1-208ENST00000600970 NEUROG3Q9Y4Z2 214 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 FAM208BQ5VWN6 2430 aa17.95■□□□□ 0.46
USE1-208ENST00000600970 CEP192Q8TEP8 1941 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 ADAMTS9Q9P2N4 1935 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 CACNA1GO43497 2377 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 MYMKA6NI61 221 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 H3BQV1 296 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 SGK1O00141 431 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 MAP3K13O43283 966 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 KLF8O95600 359 aaPredicted RBP17.94■□□□□ 0.46
USE1-208ENST00000600970 KRT19P08727 400 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 PFKLP17858 780 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 TIE1P35590 1138 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 PTGER3P43115 390 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 USP46P62068 366 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 DHCR24Q15392 516 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 C4orf50Q6ZRC1 276 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 SYT12Q8IV01 421 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 WHAMMQ8TF30 809 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 SPACA7Q96KW9 195 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 PNKPQ96T60 521 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 TRPM5Q9NZQ8 1165 aa17.94■□□□□ 0.46
USE1-208ENST00000600970 ASCC3Q8N3C0 2202 aaKnown RBP17.94■□□□□ 0.46
USE1-208ENST00000600970 LDHAP00338 332 aaKnown RBP17.93■□□□□ 0.46
USE1-208ENST00000600970 BDNFP23560 247 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 LMO2P25791 158 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 PSMC1P62191 440 aaKnown RBP17.93■□□□□ 0.46
USE1-208ENST00000600970 SLC7A9P82251 487 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 RBP5P82980 135 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 RING1Q06587 406 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 ACAP1Q15027 740 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 HSF5Q4G112 596 aaPredicted RBP17.93■□□□□ 0.46
USE1-208ENST00000600970 L1TD1Q5T7N2 865 aaKnown RBP17.93■□□□□ 0.46
USE1-208ENST00000600970 EMC10Q5UCC4 262 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 SLC23A3Q6PIS1 610 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 LRSAM1Q6UWE0 723 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 VSTM1Q6UX27 236 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 PIP4P1Q86T03 277 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 MYLPFQ96A32 169 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 ACCSQ96QU6 501 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 SYT15Q9BQS2 421 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 RNF38Q9H0F5 515 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 MRPL44Q9H9J2 332 aaKnown RBP17.93■□□□□ 0.46
USE1-208ENST00000600970 POLMQ9NP87 494 aaPredicted RBP17.93■□□□□ 0.46
USE1-208ENST00000600970 KLK13Q9UKR3 277 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 CDH9Q9ULB4 789 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 EXOC7Q9UPT5 735 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 MSRB2Q9Y3D2 182 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 BAHCC1Q9P281 2608 aa17.93■□□□□ 0.46
USE1-208ENST00000600970 ATXN2Q99700 1313 aaKnown RBP17.93■□□□□ 0.46
USE1-208ENST00000600970 CEP295Q9C0D2 2601 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 SPAARA0A1B0GVQ0 90 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 GOLGA8IPA6NC78 632 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 GOLGA8JA6NMD2 632 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 KAT7O95251 611 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 APODP05090 189 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 GARTP22102 1010 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 GJB2P29033 226 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 GRIK1P39086 918 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 KIR2DL1P43626 348 aaPredicted RBP17.92■□□□□ 0.46
USE1-208ENST00000600970 SEMA3BQ13214 749 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 MAP7D1Q3KQU3 841 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 EOGTQ5NDL2 527 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 DENND5BQ6ZUT9 1274 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 DPH6Q7L8W6 267 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 LIMS2Q7Z4I7 341 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 C12orf40Q86WS4 652 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 KIAA1958Q8N8K9 716 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 KBTBD7Q8WVZ9 684 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 CEP295NLQ96MC4 621 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 TTLL2Q9BWV7 592 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 MTMR12Q9C0I1 747 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 PDE11AQ9HCR9 933 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 ZDHHC4Q9NPG8 344 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 CRTAC1Q9NQ79 661 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 TBC1D7Q9P0N9 293 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 BCCIPQ9P287 314 aaKnown RBP eCLIP17.92■□□□□ 0.46
USE1-208ENST00000600970 SEL1LQ9UBV2 794 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 PILRBQ9UKJ0 227 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 LHX6Q9UPM6 363 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 CPQQ9Y646 472 aa17.92■□□□□ 0.46
USE1-208ENST00000600970 MYOFQ9NZM1 2061 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms