RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 CA8P35219 290 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 NOP2P46087 812 aaKnown RBP12.21□□□□□ -0.45
ZNF548-211ENST00000600927 CBX2Q14781 532 aaPredicted RBP12.21□□□□□ -0.45
ZNF548-211ENST00000600927 FAM171A1Q5VUB5 890 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 LILRA6Q6PI73 481 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 ZNF572Q7Z3I7 529 aaPredicted RBP12.21□□□□□ -0.45
ZNF548-211ENST00000600927 UNC93AQ86WB7 457 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 PHF13Q86YI8 300 aaPredicted RBP12.21□□□□□ -0.45
ZNF548-211ENST00000600927 LRRC57Q8N9N7 239 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 CMASQ8NFW8 434 aaPredicted RBP12.21□□□□□ -0.45
ZNF548-211ENST00000600927 SLC35G2Q8TBE7 412 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 HDAC7Q8WUI4 952 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 RIN2Q8WYP3 895 aaPredicted RBP12.21□□□□□ -0.45
ZNF548-211ENST00000600927 PBKQ96KB5 322 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 ZNF560Q96MR9 790 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 ARID3AQ99856 593 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 RHOBTB2Q9BYZ6 727 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 ABCB6Q9NP58 842 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 SEPT11Q9NVA2 429 aaKnown RBP12.21□□□□□ -0.45
ZNF548-211ENST00000600927 GDAP2Q9NXN4 497 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 MTRRQ9UBK8 725 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 TFR2Q9UP52 801 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 CAPN6Q9Y6Q1 641 aa12.21□□□□□ -0.45
ZNF548-211ENST00000600927 LOC730098B7Z3J9 87 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 BUB1O43683 1085 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 TBC1D4O60343 1298 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 CILPO75339 1184 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 PALMO75781 387 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 ATP1A1P05023 1023 aaKnown RBP12.2□□□□□ -0.46
ZNF548-211ENST00000600927 VDRP11473 427 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 KLRC2P26717 231 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 POLR2BP30876 1174 aaKnown RBP12.2□□□□□ -0.46
ZNF548-211ENST00000600927 BRCC3P46736 316 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 TNNC1P63316 161 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
ZNF548-211ENST00000600927 PSMD5Q16401 504 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 LIN9Q5TKA1 542 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 KIAA1841Q6NSI8 718 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 C11orf63Q6NUN7 778 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 PRSS55Q6UWB4 352 aaPredicted RBP12.2□□□□□ -0.46
ZNF548-211ENST00000600927 LIMS2Q7Z4I7 341 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 MCOLN2Q8IZK6 566 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 GJD3Q8N144 294 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 TMEM130Q8N3G9 435 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 TMEM35BQ8NCS4 154 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 FEZF2Q8TBJ5 459 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.46
ZNF548-211ENST00000600927 CLSTN3Q9BQT9 956 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 TLR10Q9BXR5 811 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 PDCL3Q9H2J4 239 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 SFXN1Q9H9B4 322 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 MRPL47Q9HD33 250 aaKnown RBP12.2□□□□□ -0.46
ZNF548-211ENST00000600927 CDH22Q9UJ99 828 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
ZNF548-211ENST00000600927 TSC2P49815 1807 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 CTAGE15A4D2H0 777 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 GRID2IPA4D2P6 1211 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 MIF4GDA9UHW6 222 aaKnown RBP12.19□□□□□ -0.46
ZNF548-211ENST00000600927 M0QZQ0 153 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 SYN3O14994 580 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 TGM5O43548 720 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 GLUD1P00367 558 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 CALB1P05937 261 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 CTAGE8P0CG41 777 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 TKTP29401 623 aaKnown RBP12.19□□□□□ -0.46
ZNF548-211ENST00000600927 NSFP46459 744 aaKnown RBP12.19□□□□□ -0.46
ZNF548-211ENST00000600927 NOMO3P69849 1222 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 MRPL58Q14197 206 aaKnown RBP12.19□□□□□ -0.46
ZNF548-211ENST00000600927 RPS6KA1Q15418 735 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 CNGA2Q16280 664 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 TAF3Q5VWG9 929 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 C9orf57Q5W0N0 161 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 RSPO2Q6UXX9 243 aaPredicted RBP12.19□□□□□ -0.46
ZNF548-211ENST00000600927 CTAGE6Q86UF2 777 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 PALB2Q86YC2 1186 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 CTAGE4Q8IX94 777 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 SPATA18Q8TC71 538 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 TMEM176AQ96HP8 235 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 SUSD3Q96L08 255 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 OSBPL9Q96SU4 736 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 PHF7Q9BWX1 381 aaPredicted RBP12.19□□□□□ -0.46
ZNF548-211ENST00000600927 CARD6Q9BX69 1037 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 MIS12Q9H081 205 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 THAP2Q9H0W7 228 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 MAN1C1Q9NR34 630 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 TAS2R14Q9NYV8 317 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 NXF1Q9UBU9 619 aaKnown RBP12.19□□□□□ -0.46
ZNF548-211ENST00000600927 FBXW11Q9UKB1 542 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 AMFRQ9UKV5 643 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 BACE2Q9Y5Z0 518 aa12.19□□□□□ -0.46
ZNF548-211ENST00000600927 I3L4J1 428 aa12.18□□□□□ -0.46
ZNF548-211ENST00000600927 PPEF2O14830 753 aa12.18□□□□□ -0.46
ZNF548-211ENST00000600927 ADAM12O43184 909 aa12.18□□□□□ -0.46
ZNF548-211ENST00000600927 THAP12O43422 761 aa12.18□□□□□ -0.46
ZNF548-211ENST00000600927 TRAPPC3O43617 180 aa12.18□□□□□ -0.46
ZNF548-211ENST00000600927 TADA3O75528 432 aa12.18□□□□□ -0.46
ZNF548-211ENST00000600927 WEE2P0C1S8 567 aa12.18□□□□□ -0.46
ZNF548-211ENST00000600927 RPL17P18621 184 aaKnown RBP12.18□□□□□ -0.46
ZNF548-211ENST00000600927 SLC1A1P43005 524 aa12.18□□□□□ -0.46
ZNF548-211ENST00000600927 PAFAH1B1P43034 410 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms