RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 C2orf78A6NCI8 922 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PRPF40AO75400 957 aaKnown RBP10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 RPP40O75818 363 aaKnown RBP10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 NOL4O94818 638 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 FGF19O95750 216 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 KRT18P05783 430 aaKnown RBP10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GJA4P35212 333 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DDIT3P35638 169 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GALK1P51570 392 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 MTF1Q14872 753 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 SV2CQ496J9 727 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 COLEC12Q5KU26 742 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 MON1AQ86VX9 555 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 SYNPOQ8N3V7 929 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DEFB124Q8NES8 71 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 OR5B17Q8NGF7 314 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 MDM1Q8TC05 714 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 C2orf15Q8WU43 125 aaKnown RBP10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 KBTBD7Q8WVZ9 684 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 POMGNT1Q8WZA1 660 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DUSP15Q9H1R2 295 aaPredicted RBP10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PDE11AQ9HCR9 933 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 TDP1Q9NUW8 608 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 TMEM30AQ9NV96 361 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DDX43Q9NXZ2 648 aaKnown RBP10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 GTF3C4Q9UKN8 822 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 DSEQ9UL01 958 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 AGAP1Q9UPQ3 857 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 PCDHB5Q9Y5E4 795 aa10.84□□□□□ -0.67
MIA-RAB4B-201ENST00000600729 FRMD3A2A2Y4 597 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 GABRDO14764 452 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 HNRNPLP14866 589 aaKnown RBP eCLIP10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 PAX3P23760 479 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 LMO2P25791 158 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 HOXD13P35453 343 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 PI4KAP42356 2102 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 USP46P62068 366 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 PSMC1P62191 440 aaKnown RBP10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 TFAMQ00059 246 aaKnown RBP10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 BFSP1Q12934 665 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 RESTQ13127 1097 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 ZNF268Q14587 947 aaPredicted RBP10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 SOWAHAQ2M3V2 549 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 EML3Q32P44 896 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 PLK5Q496M5 336 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 L1TD1Q5T7N2 865 aaKnown RBP10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 SLFN12LQ6IEE8 588 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 LIMS2Q7Z4I7 341 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 METTL23Q86XA0 190 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 THEM5Q8N1Q8 247 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 RPLP0P6Q8NHW5 317 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 HPS3Q969F9 1004 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 LOXL4Q96JB6 756 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 MYRFLQ96LU7 910 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 GCNAQ96QF7 691 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 MTMR12Q9C0I1 747 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 LINC00597Q9H2U6 94 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 PCIF1Q9H4Z3 704 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 ECT2Q9H8V3 914 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 CRTAC1Q9NQ79 661 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 SMC3Q9UQE7 1217 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 KIF3AQ9Y496 699 aa10.83□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 CCDC163A0A0D9SF12 145 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 CAPN8A6NHC0 703 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 SCAMP3O14828 347 aaKnown RBP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 PRPF6O94906 941 aaKnown RBP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 IL18RAPO95256 599 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 CSH1P0DML2 217 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 CSH2P0DML3 217 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 SCP2P22307 547 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 DDX6P26196 483 aaKnown RBP eCLIP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 AVPR1AP37288 418 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 MPLP40238 635 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 OPRD1P41143 372 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 CACNA2D1P54289 1103 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 POU5F1Q01860 360 aaKnown RBP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 CFHR1Q03591 330 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 SMARCB1Q12824 385 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 FAM171BQ6P995 826 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 BRAPQ7Z569 592 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 DCP1BQ8IZD4 617 aaKnown RBP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 CHCHD4Q8N4Q1 142 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 ARL14EPQ8N8R7 260 aaPredicted RBP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 HVCN1Q96D96 273 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 TRMT2BQ96GJ1 504 aaKnown RBP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 ZC3H10Q96K80 434 aaKnown RBP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 ZNF560Q96MR9 790 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 P2RY13Q9BPV8 354 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 ACBD6Q9BR61 282 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 KIF9Q9HAQ2 790 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 TRPC7Q9HCX4 862 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 VPS45Q9NRW7 570 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 THG1LQ9NWX6 298 aaKnown RBP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 GDAP2Q9NXN4 497 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 RBAKQ9NYW8 714 aaPredicted RBP10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 INVSQ9Y283 1065 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 SNX9Q9Y5X1 595 aa10.82□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 DNHD1Q96M86 4753 aa10.81□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 MYH10P35580 1976 aa10.81□□□□□ -0.68
MIA-RAB4B-201ENST00000600729 MUC22E2RYF6 1773 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms