RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ERCC5P28715 1186 aaPredicted RBP9.34□□□□□ -0.91
SSBP4-208ENST00000600628 VIPR2P41587 438 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 RAD23BP54727 409 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 FZD5Q13467 585 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 DPCR1Q3MIW9 517 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 ASTLQ6HA08 431 aaPredicted RBP9.34□□□□□ -0.91
SSBP4-208ENST00000600628 SCARA5Q6ZMJ2 495 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 DENND5BQ6ZUT9 1274 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 ACOT1Q86TX2 421 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 FAM35AQ86V20 835 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 TTC39CQ8N584 583 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 TMEM105Q8N8V8 129 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 C12orf29Q8N999 325 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 SLC4A11Q8NBS3 891 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 STKLD1Q8NE28 680 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 FLCNQ8NFG4 579 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 RIN3Q8TB24 985 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 DEPDC1BQ8WUY9 529 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 OVCA2Q8WZ82 227 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 DNASE1L2Q92874 299 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 SMARCD1Q96GM5 515 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 SLC22A12Q96S37 553 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 KCNK16Q96T55 309 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 FAM83CQ9BQN1 747 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 SRRTQ9BXP5 876 aaKnown RBP9.34□□□□□ -0.91
SSBP4-208ENST00000600628 OSBPL6Q9BZF3 934 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 IMPG2Q9BZV3 1241 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 PNPLA8Q9NP80 782 aa9.34□□□□□ -0.91
SSBP4-208ENST00000600628 ZNF840PA6NDX5 716 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 HEPACAM2A8MVW5 462 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 CHADO15335 359 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 OAS1P00973 400 aaKnown RBP9.33□□□□□ -0.92
SSBP4-208ENST00000600628 AOC1P19801 751 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 PPP3CCP48454 512 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 ZNF132P52740 706 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 STX17P56962 302 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 ZXDBP98169 803 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 CYP4F8P98187 520 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 CYP27A1Q02318 531 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 GCNT1Q02742 428 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 KCNH2Q12809 1159 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 TCF15Q12870 199 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 CUL2Q13617 745 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 PKDCCQ504Y2 493 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 GPR158Q5T848 1215 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 ARHGAP17Q68EM7 881 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 TXNDC8Q6A555 127 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 KLHL10Q6JEL2 608 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 CLEC20AQ6ZU45 233 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 ZNF276Q8N554 614 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 PRSS33Q8NF86 280 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 USP13Q92995 863 aaPredicted RBP9.33□□□□□ -0.92
SSBP4-208ENST00000600628 CHFRQ96EP1 664 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 GBP4Q96PP9 640 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 NT5C1AQ9BXI3 368 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 NUP62CLQ9H1M0 184 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 ATXN3LQ9H3M9 355 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 ARHGEF3Q9NR81 526 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 CISHQ9NSE2 258 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 COMMD8Q9NX08 183 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 CA14Q9ULX7 337 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 CCL26Q9Y258 94 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 USP3Q9Y6I4 520 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 MYO16Q9Y6X6 1858 aa9.33□□□□□ -0.92
SSBP4-208ENST00000600628 GTPBP10A4D1E9 387 aaKnown RBP9.32□□□□□ -0.92
SSBP4-208ENST00000600628 PI15O43692 258 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 CCDC130P13994 396 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 GLULP15104 373 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 GRIK1P39086 918 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 PGFP49763 221 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 TUBP50607 506 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 KIF11P52732 1056 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 SLC7A9P82251 487 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 PFKPQ01813 784 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 NHLH1Q02575 133 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 PRKCQQ04759 706 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 USP4Q13107 963 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 ZNF77Q15935 545 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 SLC44A4Q53GD3 710 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 DCAF17Q5H9S7 520 aaPredicted RBP9.32□□□□□ -0.92
SSBP4-208ENST00000600628 WDR44Q5JSH3 913 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 RAB41Q5JT25 222 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 MIIPQ5JXC2 388 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
SSBP4-208ENST00000600628 TCERG1LQ5VWI1 586 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 MAMSTRQ6ZN01 415 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 NUP93Q8N1F7 819 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 MAB21L3Q8N8X9 362 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 EHBP1Q8NDI1 1231 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 FAM200AQ8TCP9 573 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 SLC2A14Q8TDB8 520 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 IRF7Q92985 503 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 CLDN23Q96B33 292 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 CYFIP2Q96F07 1278 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 ZFRQ96KR1 1074 aaKnown RBP9.32□□□□□ -0.92
SSBP4-208ENST00000600628 KREMEN1Q96MU8 473 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 ZSWIM1Q9BR11 485 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 TRMT61BQ9BVS5 477 aaKnown RBP9.32□□□□□ -0.92
SSBP4-208ENST00000600628 UBXN6Q9BZV1 441 aa9.32□□□□□ -0.92
SSBP4-208ENST00000600628 THAP9Q9H5L6 903 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms