RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 GRIK1P39086 918 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 PIK3CAP42336 1068 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 NDST1P52848 882 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 MLLT6P55198 1093 aaPredicted RBP12.93□□□□□ -0.34
LIG1-217ENST00000599165 NOP14P78316 857 aaKnown RBP12.93□□□□□ -0.34
LIG1-217ENST00000599165 INCA1Q0VD86 236 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 USP4Q13107 963 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 GAS6Q14393 721 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 ZNF268Q14587 947 aaPredicted RBP12.93□□□□□ -0.34
LIG1-217ENST00000599165 ZNF77Q15935 545 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 ARHGAP29Q52LW3 1261 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 TRIM68Q6AZZ1 485 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 ISM2Q6H9L7 571 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 ZNF852Q6ZMS4 543 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 DENND5BQ6ZUT9 1274 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 ASCL5Q7RTU5 278 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 ACOT1Q86TX2 421 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 C1orf210Q8IVY1 113 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 CRYBG2Q8N1P7 616 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 ARL14EPQ8N8R7 260 aaPredicted RBP12.93□□□□□ -0.34
LIG1-217ENST00000599165 TTC8Q8TAM2 541 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 MRPS31Q92665 395 aaKnown RBP12.93□□□□□ -0.34
LIG1-217ENST00000599165 SMARCE1Q969G3 411 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 CEP295NLQ96MC4 621 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 ELOVL4Q9GZR5 314 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 MMRN2Q9H8L6 949 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 TMEM8AQ9HCN3 771 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 TDP1Q9NUW8 608 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 RMND1Q9NWS8 449 aa12.93□□□□□ -0.34
LIG1-217ENST00000599165 UXTQ9UBK9 157 aaPredicted RBP12.93□□□□□ -0.34
LIG1-217ENST00000599165 NDRG2Q9UN36 371 aaKnown RBP12.93□□□□□ -0.34
LIG1-217ENST00000599165 ZNF840PA6NDX5 716 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 PPP1R3GB7ZBB8 358 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 SPECC1L-ADORA2AF8WAN1 911 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 TRIM66O15016 1216 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 OLFM2O95897 454 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 SP9P0CG40 484 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 CHRNB1P11230 501 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 CCDC130P13994 396 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 CCNE1P24864 410 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 CTHP32929 405 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 RPS9P46781 194 aaKnown RBP12.92□□□□□ -0.34
LIG1-217ENST00000599165 PGFP49763 221 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 CBWD6Q4V339 395 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 CBWD3Q5JTY5 395 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 CBWD5Q5RIA9 395 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 NAIF1Q69YI7 327 aaPredicted RBP12.92□□□□□ -0.34
LIG1-217ENST00000599165 YAF2Q8IY57 180 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 C12orf29Q8N999 325 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 FAM3CQ92520 227 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 SMOQ99835 787 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 DUSP9Q99956 384 aaKnown RBP12.92□□□□□ -0.34
LIG1-217ENST00000599165 IRF2BPLQ9H1B7 796 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 GKN1Q9NS71 199 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 IL37Q9NZH6 218 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 ZMYM5Q9UJ78 669 aa12.92□□□□□ -0.34
LIG1-217ENST00000599165 FAM92AA1XBS5 289 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 MAN2B1O00754 1011 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 DPYSL4O14531 572 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 CETN3O15182 167 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 SMC2O95347 1197 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 TDGF1P13385 188 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 KRT13P13646 458 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 ARSAP15289 507 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 HOXC13P31276 330 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 GTF2H1P32780 548 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 AVPR1AP37288 418 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 TAF10Q12962 218 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 MTAPQ13126 283 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 MORC3Q14149 939 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 KRT39Q6A163 491 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 TTI2Q6NXR4 508 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 UNC93AQ86WB7 457 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 SCAMP5Q8TAC9 235 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 NELL1Q92832 810 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 SLC35C1Q96A29 364 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 NELL2Q99435 816 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 ARID3AQ99856 593 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 NIF3L1Q9GZT8 377 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 RNF38Q9H0F5 515 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 CHRDQ9H2X0 955 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 KIF9Q9HAQ2 790 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 CSNK1G1Q9HCP0 422 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 TRPC7Q9HCX4 862 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 PRMT8Q9NR22 394 aaPredicted RBP12.91□□□□□ -0.34
LIG1-217ENST00000599165 KRT82Q9NSB4 513 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 RBM12Q9NTZ6 932 aaKnown RBP12.91□□□□□ -0.34
LIG1-217ENST00000599165 FAM49BQ9NUQ9 324 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 C2orf42Q9NWW7 574 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 R4GN57 208 aa12.91□□□□□ -0.34
LIG1-217ENST00000599165 TRAV19A0A0A6YYK7 116 aa12.9□□□□□ -0.34
LIG1-217ENST00000599165 PRR23AA6NEV1 266 aa12.9□□□□□ -0.34
LIG1-217ENST00000599165 HHLA1C9JL84 531 aa12.9□□□□□ -0.34
LIG1-217ENST00000599165 SLC16A3O15427 465 aaKnown RBP12.9□□□□□ -0.34
LIG1-217ENST00000599165 CILPO75339 1184 aa12.9□□□□□ -0.34
LIG1-217ENST00000599165 OAS1P00973 400 aaKnown RBP12.9□□□□□ -0.34
LIG1-217ENST00000599165 TCF3P15923 654 aa12.9□□□□□ -0.34
LIG1-217ENST00000599165 ANXA13P27216 316 aa12.9□□□□□ -0.34
LIG1-217ENST00000599165 MXI1P50539 228 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms