RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 CD59P13987 128 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 NMT1P30419 496 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 AVPR1AP37288 418 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 NCKAP1LP55160 1127 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 STK4Q13043 487 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 ZNF568Q3ZCX4 644 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 COBLL1Q53SF7 1204 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 CENPPQ6IPU0 288 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 EPM2AIP1Q7L775 607 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 ITIH5Q86UX2 942 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 CMTM8Q8IZV2 173 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 CPA6Q8N4T0 437 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 DEFB119Q8N690 84 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 MYCT1Q8N699 235 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 PIP4K2CQ8TBX8 421 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 USP13Q92995 863 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 HPS3Q969F9 1004 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 CCDC47Q96A33 483 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 EXOC4Q96A65 974 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 SEPT5Q99719 369 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 GTPBP4Q9BZE4 634 aaKnown RBP14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 ST6GALNAC4Q9H4F1 302 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 EXOC1Q9NV70 894 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 KCNG1Q9UIX4 513 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 SLC6A14Q9UN76 642 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 ASB3Q9Y575 518 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 HECTD1Q9ULT8 2610 aa14.94□□□□□ -0.02
SHKBP1-218ENST00000598907 PCDH15Q96QU1 1955 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 BIN1O00499 593 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 HARSP12081 509 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 CDC25CP30307 473 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 P2RY2P41231 377 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 GRM5P41594 1212 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 NAMPTP43490 491 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 NPTX2P47972 431 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 NLRP12P59046 1061 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 PPP2R5AQ15172 486 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 TAF12Q16514 161 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 FAM26FQ5R3K3 315 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 ZNF720Q7Z2F6 126 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 APBB1IPQ7Z5R6 666 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 MARCH9Q86YJ5 346 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 MAB21L3Q8N8X9 362 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 KIAA0895Q8NCT3 520 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 FGFBP2Q9BYJ0 223 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 CDT1Q9H211 546 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 IL21Q9HBE4 155 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 BCCIPQ9P287 314 aaKnown RBP eCLIP14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 TUBGCP4Q9UGJ1 667 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 PILRBQ9UKJ0 227 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 TBX20Q9UMR3 447 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 PTPRDP23468 1912 aa14.93□□□□□ -0.02
SHKBP1-218ENST00000598907 PI4KAP42356 2102 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 PPP1R37O75864 691 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 WEE1P30291 646 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 RPL9P32969 192 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 ABCG1P45844 678 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 PEX3P56589 373 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 ZNF445P59923 1031 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 CYP4F3Q08477 520 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 HNRNPDQ14103 355 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 VEPH1Q14D04 833 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 PDGFRLQ15198 375 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 LMBRD2Q68DH5 695 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 ISM2Q6H9L7 571 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 SASS6Q6UVJ0 657 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 USP37Q86T82 979 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 LURAP1LQ8IV03 231 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 NAXDQ8IW45 347 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 TMEM161BQ8NDZ6 487 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 OLIG1Q8TAK6 271 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 ZNF507Q8TCN5 953 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 USP33Q8TEY7 942 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 GIPC2Q8TF65 315 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 IFT74Q96LB3 600 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 GZF1Q9H116 711 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 ZHX3Q9H4I2 956 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 ECT2Q9H8V3 914 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 SLC39A2Q9NP94 309 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 ARHGAP28Q9P2N2 729 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 WNT6Q9Y6F9 365 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 SHROOM3Q8TF72 1996 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 CFAP46Q8IYW2 2715 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 ASXL3Q9C0F0 2248 aa14.92□□□□□ -0.02
SHKBP1-218ENST00000598907 ZNF638Q14966 1978 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 PPP1R3GB7ZBB8 358 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 ATXN7O15265 892 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 ALDH1A2O94788 518 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 HNRNPLP14866 589 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 ATF6P18850 670 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 SCP2P22307 547 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 CASP5P51878 434 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 SMTNP53814 917 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 GTF2BQ00403 316 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 TYRO3Q06418 890 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 GPR17Q13304 367 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 DMP1Q13316 513 aaPredicted RBP14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 DUOXA1Q1HG43 343 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 BMT2Q1RMZ1 405 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms