RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 OLFM2O95897 454 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 MYL1P05976 194 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 DLATP10515 647 aaKnown RBP14.52□□□□□ -0.09
TRIM28-211ENST00000597968 ARSAP15289 507 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 BDNFP23560 247 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 EIF2DP41214 584 aaKnown RBP14.52□□□□□ -0.09
TRIM28-211ENST00000597968 CLDN10P78369 228 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 DMWDQ09019 674 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 TRPC3Q13507 836 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 KNOP1Q1ED39 458 aaKnown RBP14.52□□□□□ -0.09
TRIM28-211ENST00000597968 SDHAF4Q5VUM1 108 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 LMBRD2Q68DH5 695 aaPredicted RBP14.52□□□□□ -0.09
TRIM28-211ENST00000597968 SH3RF2Q8TEC5 729 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 SLITRK1Q96PX8 696 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 COMMD8Q9NX08 183 aa14.52□□□□□ -0.09
TRIM28-211ENST00000597968 ATP8B3O60423 1300 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 ZNF840PA6NDX5 716 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 RTN3O95197 1032 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 EPN2O95208 641 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 CST3P01034 146 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 EGFP01133 1207 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 ZNF806P0C7X5 589 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 PTPN1P18031 435 aaKnown RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 PSMC1P62191 440 aaKnown RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 CYP27A1Q02318 531 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 LPAL2Q16609 132 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 WDR72Q3MJ13 1102 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 FOXD4L6Q3SYB3 417 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 HSF5Q4G112 596 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 TDRD10Q5VZ19 366 aaKnown RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 HEATR6Q6AI08 1181 aaKnown RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 FOXD4L3Q6VB84 417 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 SLC9A9Q8IVB4 645 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 ARL14EPQ8N8R7 260 aaPredicted RBP14.51□□□□□ -0.09
TRIM28-211ENST00000597968 SPRYD3Q8NCJ5 442 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 GLIS3Q8NEA6 775 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 RIN3Q8TB24 985 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 OTUB2Q96DC9 234 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 TNIP3Q96KP6 325 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 SLC22A12Q96S37 553 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 CYP2S1Q96SQ9 504 aa14.51□□□□□ -0.09
TRIM28-211ENST00000597968 OBSL1O75147 1896 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 C2orf78A6NCI8 922 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 AXIN1O15169 862 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 ATP2C2O75185 946 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 APBB3O95704 486 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 PDGFRBP09619 1106 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 CCDC192P0DO97 292 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 ZSCAN22P10073 491 aaPredicted RBP14.5□□□□□ -0.09
TRIM28-211ENST00000597968 TUBP50607 506 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 CDR1P51861 262 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 PREPLQ4J6C6 727 aaPredicted RBP14.5□□□□□ -0.09
TRIM28-211ENST00000597968 SNX30Q5VWJ9 437 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 RESP18Q5W5W9 173 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 SCARA3Q6AZY7 606 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 CEP57L1Q8IYX8 460 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 RDH13Q8NBN7 331 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 B3GALNT2Q8NCR0 500 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 STKLD1Q8NE28 680 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 OR6B3Q8NGW1 331 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 HPS3Q969F9 1004 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 C2orf42Q9NWW7 574 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 TBC1D14Q9P2M4 693 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 USP25Q9UHP3 1055 aa14.5□□□□□ -0.09
TRIM28-211ENST00000597968 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.5□□□□□ -0.09
TRIM28-211ENST00000597968 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.49□□□□□ -0.09
TRIM28-211ENST00000597968 A8MXQ7 604 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 F8VP50 259 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 CLIC2O15247 247 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 EXOC3O60645 756 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 RHOBTB1O94844 696 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 KIF20AO95235 890 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 F13A1P00488 732 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 OAS1P00973 400 aaKnown RBP14.49□□□□□ -0.09
TRIM28-211ENST00000597968 RPN1P04843 607 aaKnown RBP14.49□□□□□ -0.09
TRIM28-211ENST00000597968 SLFN14P0C7P3 912 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 P4HA1P13674 534 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 TRIM21P19474 475 aaKnown RBP14.49□□□□□ -0.09
TRIM28-211ENST00000597968 ME1P48163 572 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 CYP2J2P51589 502 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 MRPS21P82921 87 aaKnown RBP14.49□□□□□ -0.09
TRIM28-211ENST00000597968 MDH1BQ5I0G3 518 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 PLA2G2CQ5R387 149 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 HSCBQ8IWL3 235 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 ADGRG2Q8IZP9 1017 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 NUP93Q8N1F7 819 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 C12orf50Q8NA57 414 aaPredicted RBP14.49□□□□□ -0.09
TRIM28-211ENST00000597968 RPLP0P6Q8NHW5 317 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 PARD3BQ8TEW8 1205 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 TAF4BQ92750 862 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 CCDC127Q96BQ5 260 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 MRPL45Q9BRJ2 306 aaKnown RBP14.49□□□□□ -0.09
TRIM28-211ENST00000597968 XYLT2Q9H1B5 865 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 FBRSL1Q9HCM7 1045 aaKnown RBP14.49□□□□□ -0.09
TRIM28-211ENST00000597968 RCOR1Q9UKL0 485 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 PCDHA7Q9UN72 937 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 GTF3C3Q9Y5Q9 886 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 WNT6Q9Y6F9 365 aa14.49□□□□□ -0.09
TRIM28-211ENST00000597968 A0A0A0MRY4 1105 aa14.48□□□□□ -0.09
TRIM28-211ENST00000597968 LEFTY2O00292 366 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms