RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 FNBP1Q96RU3 617 aa18.16■□□□□ 0.5
PNKP-210ENST00000597965 SNX25Q9H3E2 840 aa18.16■□□□□ 0.5
PNKP-210ENST00000597965 HELZP42694 1942 aaKnown RBP18.15■□□□□ 0.5
PNKP-210ENST00000597965 CHD8Q9HCK8 2581 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 BCLAF3A2AJT9 711 aaKnown RBP18.15■□□□□ 0.5
PNKP-210ENST00000597965 EIF3DO15371 548 aaKnown RBP eCLIP18.15■□□□□ 0.5
PNKP-210ENST00000597965 BDNFP23560 247 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 PMLP29590 882 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 HOXC13P31276 330 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 SLC7A9P82251 487 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 MRPS21P82921 87 aaKnown RBP18.15■□□□□ 0.5
PNKP-210ENST00000597965 PREPLQ4J6C6 727 aaPredicted RBP18.15■□□□□ 0.5
PNKP-210ENST00000597965 N4BP2L1Q5TBK1 243 aaPredicted RBP18.15■□□□□ 0.5
PNKP-210ENST00000597965 TDRD10Q5VZ19 366 aaKnown RBP18.15■□□□□ 0.5
PNKP-210ENST00000597965 LMBRD2Q68DH5 695 aaPredicted RBP18.15■□□□□ 0.5
PNKP-210ENST00000597965 KBTBD7Q8WVZ9 684 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 PCED1BQ96HM7 432 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 C8orf48Q96LL4 319 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 TTLL2Q9BWV7 592 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 HSPBP1Q9NZL4 362 aa18.15■□□□□ 0.5
PNKP-210ENST00000597965 MAP1BP46821 2468 aaKnown RBP18.14■□□□□ 0.5
PNKP-210ENST00000597965 LEFTY2O00292 366 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 TACC1O75410 805 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 KCNK5O95279 499 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 TNNI1P19237 187 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 SYT1P21579 422 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 LMO2P25791 158 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 GNL1P36915 607 aaPredicted RBP18.14■□□□□ 0.49
PNKP-210ENST00000597965 EIF2DP41214 584 aaKnown RBP18.14■□□□□ 0.49
PNKP-210ENST00000597965 PSMC1P62191 440 aaKnown RBP18.14■□□□□ 0.49
PNKP-210ENST00000597965 TNNC1P63316 161 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 RESTQ13127 1097 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 HS2ST1Q7LGA3 356 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 USP33Q8TEY7 942 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 INTS4Q96HW7 963 aaKnown RBP18.14■□□□□ 0.49
PNKP-210ENST00000597965 CNOT6LQ96LI5 555 aaKnown RBP18.14■□□□□ 0.49
PNKP-210ENST00000597965 EDEM2Q9BV94 578 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 PANK2Q9BZ23 570 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 ELOVL4Q9GZR5 314 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 LINC00597Q9H2U6 94 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 RXFP3Q9NSD7 469 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 TBC1D14Q9P2M4 693 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 MMP17Q9ULZ9 603 aa18.14■□□□□ 0.49
PNKP-210ENST00000597965 ZNF840PA6NDX5 716 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.13■□□□□ 0.49
PNKP-210ENST00000597965 KHNYNO15037 678 aaKnown RBP18.13■□□□□ 0.49
PNKP-210ENST00000597965 ATP2C2O75185 946 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 ADH1CP00326 375 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 PDGFRBP09619 1106 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 DPP6P42658 865 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 BYSLQ13895 437 aaKnown RBP18.13■□□□□ 0.49
PNKP-210ENST00000597965 SNRNP35Q16560 246 aaKnown RBP18.13■□□□□ 0.49
PNKP-210ENST00000597965 C2orf27AQ580R0 203 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 PMS2CLQ68D20 193 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 NUDT18Q6ZVK8 323 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 TRAPPC11Q7Z392 1133 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 RASSF3Q86WH2 238 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 CBWD2Q8IUF1 395 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 ADGRG2Q8IZP9 1017 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 PDILTQ8N807 584 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 PDZD8Q8NEN9 1154 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 OR5B17Q8NGF7 314 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 SPACA7Q96KW9 195 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 CRTAC1Q9NQ79 661 aa18.13■□□□□ 0.49
PNKP-210ENST00000597965 CGNQ9P2M7 1197 aaKnown RBP18.13■□□□□ 0.49
PNKP-210ENST00000597965 KIAA1549LQ6ZVL6 1849 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 MYO16Q9Y6X6 1858 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 K7EQS6 105 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 HCRTO43612 131 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 RTN3O95197 1032 aaPredicted RBP18.12■□□□□ 0.49
PNKP-210ENST00000597965 ABL1P00519 1130 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 DLATP10515 647 aaKnown RBP18.12■□□□□ 0.49
PNKP-210ENST00000597965 TRPC3Q13507 836 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 STK38Q15208 465 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 CRY1Q16526 586 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 MDH1BQ5I0G3 518 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 NAIF1Q69YI7 327 aaPredicted RBP18.12■□□□□ 0.49
PNKP-210ENST00000597965 IQUBQ8NA54 791 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 OR6B3Q8NGW1 331 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 OVCA2Q8WZ82 227 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 EZH1Q92800 747 aaPredicted RBP18.12■□□□□ 0.49
PNKP-210ENST00000597965 OTUB2Q96DC9 234 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 PNKPQ96T60 521 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 POLMQ9NP87 494 aaPredicted RBP18.12■□□□□ 0.49
PNKP-210ENST00000597965 KBTBD4Q9NVX7 518 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 ATP8B3O60423 1300 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 UBE4BO95155 1302 aa18.12■□□□□ 0.49
PNKP-210ENST00000597965 PTPRDP23468 1912 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 F8VP50 259 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 DCLK1O15075 740 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 STAU1O95793 577 aaKnown RBP18.11■□□□□ 0.49
PNKP-210ENST00000597965 OLFM2O95897 454 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 APODP05090 189 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 ATICP31939 592 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 OPRD1P41143 372 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 NASPP49321 788 aaPredicted RBP18.11■□□□□ 0.49
PNKP-210ENST00000597965 SEC13P55735 322 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 CCDC142Q17RM4 750 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 WDR72Q3MJ13 1102 aa18.11■□□□□ 0.49
PNKP-210ENST00000597965 SPDYCQ5MJ68 293 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms