RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 MOCS3O95396 460 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 CTSAP10619 480 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 RPL17P18621 184 aaKnown RBP15.46■□□□□ 0.06
VRK3-212ENST00000596814 ACADSBP45954 432 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 RPL34P49207 117 aaKnown RBP15.46■□□□□ 0.06
VRK3-212ENST00000596814 ROR1Q01973 937 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 CREMQ03060 361 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 TCEAL1Q15170 157 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 IFI16Q16666 785 aaKnown RBP15.46■□□□□ 0.06
VRK3-212ENST00000596814 PLEKHA7Q6IQ23 1121 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 LLGL2Q6P1M3 1020 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 DNAJC24Q6P3W2 148 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 TMEM110Q86TL2 294 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 XYLT1Q86Y38 959 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 C3orf20Q8ND61 904 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 ZMIZ2Q8NF64 920 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 ZNF564Q8TBZ8 553 aaPredicted RBP15.46■□□□□ 0.06
VRK3-212ENST00000596814 SAMD11Q96NU1 681 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 CSNK1G1Q9HCP0 422 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 ABCB6Q9NP58 842 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 OSGEPQ9NPF4 335 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.46■□□□□ 0.06
VRK3-212ENST00000596814 TMEM30AQ9NV96 361 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 PARVAQ9NVD7 372 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 SSX2IPQ9Y2D8 614 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 CAPN6Q9Y6Q1 641 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 PIK3R2O00459 728 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 ADAM12O43184 909 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 CYP2F1P24903 491 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 OR1D2P34982 312 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 GNG11P61952 73 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 VSTM1Q6UX27 236 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 SPRED2Q7Z698 418 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 SPPL2BQ8TCT7 592 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 C2orf15Q8WU43 125 aaKnown RBP15.45■□□□□ 0.06
VRK3-212ENST00000596814 AUTS2Q8WXX7 1259 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 KCTD13Q8WZ19 329 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 ALS2CR12Q96Q35 445 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 KCNK16Q96T55 309 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 CLSTN3Q9BQT9 956 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 MRPL47Q9HD33 250 aaKnown RBP15.45■□□□□ 0.06
VRK3-212ENST00000596814 MTUS1Q9ULD2 1270 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 COG5Q9UP83 839 aa15.45■□□□□ 0.06
VRK3-212ENST00000596814 YBX2Q9Y2T7 364 aaKnown RBP15.45■□□□□ 0.06
VRK3-212ENST00000596814 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.44■□□□□ 0.06
VRK3-212ENST00000596814 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.44■□□□□ 0.06
VRK3-212ENST00000596814 WDR27A2RRH5 827 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 F8VP50 259 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 GOLGA8SH3BPF8 625 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 KIF2AO00139 706 aaPredicted RBP15.44■□□□□ 0.06
VRK3-212ENST00000596814 MTA2O94776 668 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 RB1P06400 928 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 BMP8BP34820 402 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 CA8P35219 290 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 PBX2P40425 430 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 MAGEA11P43364 429 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 HADHBP55084 474 aaKnown RBP15.44■□□□□ 0.06
VRK3-212ENST00000596814 UBE3AQ05086 875 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 ADIGQ0VDE8 80 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 MAMLD1Q13495 774 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 ZNF268Q14587 947 aaPredicted RBP15.44■□□□□ 0.06
VRK3-212ENST00000596814 ZNF569Q5MCW4 686 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 RNF19BQ6ZMZ0 732 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 FAM183BPQ6ZVS7 135 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 TRIM58Q8NG06 486 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 CALR3Q96L12 384 aaKnown RBP15.44■□□□□ 0.06
VRK3-212ENST00000596814 TGS1Q96RS0 853 aaKnown RBP15.44■□□□□ 0.06
VRK3-212ENST00000596814 C11orf84Q9BUA3 381 aaPredicted RBP15.44■□□□□ 0.06
VRK3-212ENST00000596814 PBX4Q9BYU1 374 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 UBXN6Q9BZV1 441 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 LRRC4Q9HBW1 653 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 ALG13Q9NP73 1137 aaKnown RBP15.44■□□□□ 0.06
VRK3-212ENST00000596814 PNPLA8Q9NP80 782 aa15.44■□□□□ 0.06
VRK3-212ENST00000596814 TCRBV5S1A1TA0A578 114 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 TRIM66O15016 1216 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 LCP1P13796 627 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 GRIK1P39086 918 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 RAB30Q15771 203 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 FAM102AQ5T9C2 384 aaPredicted RBP15.43■□□□□ 0.06
VRK3-212ENST00000596814 OR6B2Q6IFH4 312 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 TMC7Q7Z402 723 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 ZDHHC17Q8IUH5 632 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 SCN4BQ8IWT1 228 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 SIX6OS1Q8N1H7 587 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 ATAD1Q8NBU5 361 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 TPCN2Q8NHX9 752 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 POF1BQ8WVV4 589 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 MCRS1Q96EZ8 462 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 SELENOOQ9BVL4 669 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 ENTPD7Q9NQZ7 604 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 FNIP2Q9P278 1114 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 MSRAQ9UJ68 235 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 PCDHGC5Q9Y5F6 944 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.43■□□□□ 0.06
VRK3-212ENST00000596814 HHLA1C9JL84 531 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 PAPSS1O43252 624 aaPredicted RBP15.43■□□□□ 0.06
VRK3-212ENST00000596814 LILRB3O75022 631 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 GABBR2O75899 941 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 GJB6O95452 261 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 VNN2O95498 520 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms